LINC01941

Summary

LINC01941 (long intergenic non-protein coding RNA 1941, HGNC:52764) is a long non-coding RNA gene on chromosome 2q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52764
Approved symbol	LINC01941
Name	long intergenic non-protein coding RNA 1941
Location	2q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226813
Ensembl biotype	lncRNA
Entrez	105373600
RNAcentral	URS0000BC43B7 — lncRNA, 636 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000455174, ENST00000659902

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455174 — 4 exons

Exon	Start	End
ENSE00001718669	126114017	126114127
ENSE00001746817	126117923	126117985
ENSE00001760339	126110099	126110310
ENSE00001775375	126112933	126113170

Expression profiles

Bgee: expression breadth broad, 30 present calls, max score 84.43.

Top tissues by expression

30 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.43	gold quality
muscle tissue	UBERON:0002385	66.49	gold quality
monocyte	CL:0000576	54.89	gold quality
heart	UBERON:0000948	53.50	gold quality
kidney	UBERON:0002113	53.18	gold quality
blood	UBERON:0000178	51.97	silver quality
prostate gland	UBERON:0002367	48.89	silver quality
testis	UBERON:0000473	47.43	gold quality
left testis	UBERON:0004533	47.39	gold quality
subcutaneous adipose tissue	UBERON:0002190	46.32	gold quality
right lobe of liver	UBERON:0001114	46.18	silver quality
gastrocnemius	UBERON:0001388	46.12	gold quality
body of pancreas	UBERON:0001150	45.10	silver quality
right testis	UBERON:0004534	44.86	gold quality
thyroid gland	UBERON:0002046	44.72	silver quality
skin of leg	UBERON:0001511	43.61	gold quality
zone of skin	UBERON:0000014	43.31	gold quality
lung	UBERON:0002048	42.32	silver quality
esophagus mucosa	UBERON:0002469	41.72	silver quality
esophagus	UBERON:0001043	40.45	silver quality
right ovary	UBERON:0002118	40.22	silver quality
tibial nerve	UBERON:0001323	38.94	gold quality
skin of abdomen	UBERON:0001416	37.89	silver quality
spleen	UBERON:0002106	37.59	silver quality
lower esophagus muscularis layer	UBERON:0035833	36.91	silver quality
Brodmann (1909) area 9	UBERON:0013540	36.72	silver quality
left lobe of thyroid gland	UBERON:0001120	36.02	silver quality
Ammon’s horn	UBERON:0001954	36.02	silver quality
small intestine Peyer’s patch	UBERON:0003454	33.70	silver quality
right frontal lobe	UBERON:0002810	29.66	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.