LINC01942

Summary

LINC01942 (long intergenic non-protein coding RNA 1942, HGNC:52766) is a long non-coding RNA gene on chromosome 5q35.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52766
Approved symbol	LINC01942
Name	long intergenic non-protein coding RNA 1942
Location	5q35.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253428
Ensembl biotype	lncRNA
Entrez	105377736
RNAcentral	URS0000314238 — lncRNA, 513 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000521373, ENST00000732158, ENST00000732159, ENST00000732160, ENST00000732161, ENST00000732162, ENST00000732163, ENST00000732164

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000521373 — 3 exons

Exon	Start	End
ENSE00002090985	173701529	173701686
ENSE00004062227	173705590	173706383
ENSE00004062231	173689451	173689553

Expression profiles

Bgee: expression breadth broad, 97 present calls, max score 74.12.

Top tissues by expression

97 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
body of pancreas	UBERON:0001150	74.12	gold quality
pancreas	UBERON:0001264	71.85	gold quality
bone marrow cell	CL:0002092	71.55	silver quality
fallopian tube	UBERON:0003889	70.49	gold quality
right lobe of liver	UBERON:0001114	69.54	gold quality
liver	UBERON:0002107	69.22	gold quality
islet of Langerhans	UBERON:0000006	67.47	gold quality
right uterine tube	UBERON:0001302	65.66	gold quality
gall bladder	UBERON:0002110	63.90	gold quality
fundus of stomach	UBERON:0001160	62.12	gold quality
colonic epithelium	UBERON:0000397	61.86	silver quality
metanephros cortex	UBERON:0010533	60.89	gold quality
cortex of kidney	UBERON:0001225	58.43	gold quality
adult mammalian kidney	UBERON:0000082	57.85	gold quality
kidney	UBERON:0002113	57.84	gold quality
thoracic mammary gland	UBERON:0005200	57.83	gold quality
monocyte	CL:0000576	56.81	gold quality
subcutaneous adipose tissue	UBERON:0002190	56.74	gold quality
left adrenal gland cortex	UBERON:0035825	56.52	gold quality
right adrenal gland cortex	UBERON:0035827	56.42	gold quality
adipose tissue	UBERON:0001013	55.75	gold quality
duodenum	UBERON:0002114	55.58	gold quality
adrenal gland	UBERON:0002369	55.21	gold quality
prefrontal cortex	UBERON:0000451	55.12	gold quality
left adrenal gland	UBERON:0001234	54.30	gold quality
omental fat pad	UBERON:0010414	53.93	gold quality
blood	UBERON:0000178	53.78	gold quality
adenohypophysis	UBERON:0002196	53.73	gold quality
right adrenal gland	UBERON:0001233	53.42	gold quality
primary visual cortex	UBERON:0002436	52.94	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.