LINC01943

Summary

LINC01943 (long intergenic non-protein coding RNA 1943, HGNC:52767) is a long non-coding RNA gene on chromosome 2p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52767
Approved symbol	LINC01943
Name	long intergenic non-protein coding RNA 1943
Location	2p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000280721
Ensembl biotype	lncRNA
Entrez	101928173
RNAcentral	URS00026A1E54 — lncRNA, 611 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000625410, ENST00000628090, ENST00000629820

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000625410 — 2 exons

Exon	Start	End
ENSE00004144988	87458857	87459111
ENSE00004144990	87439522	87439893

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 90.55.

Top tissues by expression

126 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.55	gold quality
bone marrow cell	CL:0002092	85.95	gold quality
bone marrow	UBERON:0002371	85.68	gold quality
sural nerve	UBERON:0015488	78.62	gold quality
colonic epithelium	UBERON:0000397	77.88	gold quality
lymph node	UBERON:0000029	77.33	gold quality
blood	UBERON:0000178	75.51	gold quality
granulocyte	CL:0000094	74.89	gold quality
vermiform appendix	UBERON:0001154	74.79	gold quality
tonsil	UBERON:0002372	74.75	gold quality
islet of Langerhans	UBERON:0000006	74.14	gold quality
spleen	UBERON:0002106	72.33	gold quality
stromal cell of endometrium	CL:0002255	72.32	gold quality
right lung	UBERON:0002167	70.38	gold quality
muscle tissue	UBERON:0002385	70.11	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.31	gold quality
upper lobe of left lung	UBERON:0008952	68.09	gold quality
smooth muscle tissue	UBERON:0001135	68.06	gold quality
subcutaneous adipose tissue	UBERON:0002190	67.73	gold quality
lung	UBERON:0002048	67.69	gold quality
adipose tissue	UBERON:0001013	67.44	gold quality
omental fat pad	UBERON:0010414	67.25	gold quality
leukocyte	CL:0000738	67.19	gold quality
skeletal muscle tissue	UBERON:0001134	67.13	gold quality
ganglionic eminence	UBERON:0004023	66.89	gold quality
gall bladder	UBERON:0002110	66.54	gold quality
monocyte	CL:0000576	66.53	gold quality
urinary bladder	UBERON:0001255	65.20	gold quality
right coronary artery	UBERON:0001625	65.13	gold quality
calcaneal tendon	UBERON:0003701	64.75	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.38

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.