LINC01950

Summary

LINC01950 (long intergenic non-protein coding RNA 1950, HGNC:52773) is a long non-coding RNA gene on chromosome 5q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52773
Approved symbol	LINC01950
Name	long intergenic non-protein coding RNA 1950
Location	5q21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251027
Ensembl biotype	lncRNA
Entrez	102467213
RNAcentral	URS000052B668 — lncRNA, 572 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000505997, ENST00000513273, ENST00000657922, ENST00000661979, ENST00000720345

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505997 — 3 exons

Exon	Start	End
ENSE00002030552	106980764	106980869
ENSE00002030686	106815197	106815546
ENSE00002067902	106844061	106844214

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 85.34.

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.34	gold quality
skeletal muscle tissue	UBERON:0001134	66.82	gold quality
ganglionic eminence	UBERON:0004023	65.96	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.27	gold quality
testis	UBERON:0000473	62.21	gold quality
left testis	UBERON:0004533	61.77	gold quality
right testis	UBERON:0004534	61.51	gold quality
muscle of leg	UBERON:0001383	60.48	gold quality
gastrocnemius	UBERON:0001388	59.63	gold quality
lung	UBERON:0002048	58.10	gold quality
calcaneal tendon	UBERON:0003701	57.75	gold quality
prefrontal cortex	UBERON:0000451	54.55	gold quality
monocyte	CL:0000576	54.31	gold quality
liver	UBERON:0002107	52.78	silver quality
superior frontal gyrus	UBERON:0002661	52.76	gold quality
myometrium	UBERON:0001296	52.20	gold quality
thoracic mammary gland	UBERON:0005200	52.17	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	51.32	gold quality
multicellular organism	UBERON:0000468	51.12	gold quality
blood	UBERON:0000178	50.70	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.14	gold quality
adult mammalian kidney	UBERON:0000082	49.79	gold quality
zone of skin	UBERON:0000014	49.46	gold quality
skin of leg	UBERON:0001511	49.35	gold quality
skin of abdomen	UBERON:0001416	49.34	gold quality
primary visual cortex	UBERON:0002436	49.02	silver quality
right ovary	UBERON:0002118	48.51	gold quality
placenta	UBERON:0001987	48.34	gold quality
islet of Langerhans	UBERON:0000006	47.48	gold quality
ovary	UBERON:0000992	46.87	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.