LINC01953

Summary

LINC01953 (long intergenic non-protein coding RNA 1953, HGNC:52776) is a long non-coding RNA gene on chromosome 2q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52776
Approved symbol	LINC01953
Name	long intergenic non-protein coding RNA 1953
Location	2q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236193
Ensembl biotype	lncRNA
Entrez	105373863
RNAcentral	URS0002A45D30 — lncRNA, 720 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000426870, ENST00000755151

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000426870 — 2 exons

Exon	Start	End
ENSE00001668924	213167393	213167712
ENSE00001739685	213155806	213156202

Expression profiles

Bgee: expression breadth broad, 21 present calls, max score 62.96.

Top tissues by expression

21 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
blood	UBERON:0000178	62.96	gold quality
endometrium	UBERON:0001295	50.85	silver quality
saliva-secreting gland	UBERON:0001044	50.56	gold quality
vermiform appendix	UBERON:0001154	48.65	gold quality
gastrocnemius	UBERON:0001388	45.98	gold quality
monocyte	CL:0000576	45.81	silver quality
prefrontal cortex	UBERON:0000451	45.46	silver quality
vagina	UBERON:0000996	44.51	gold quality
tibial artery	UBERON:0007610	42.20	silver quality
tonsil	UBERON:0002372	41.76	silver quality
skin of leg	UBERON:0001511	41.62	silver quality
esophagus mucosa	UBERON:0002469	41.28	silver quality
lower esophagus muscularis layer	UBERON:0035833	41.27	silver quality
heart left ventricle	UBERON:0002084	40.41	silver quality
ascending aorta	UBERON:0001496	40.11	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	39.52	silver quality
testis	UBERON:0000473	39.17	gold quality
left testis	UBERON:0004533	39.17	gold quality
right testis	UBERON:0004534	37.30	gold quality
subcutaneous adipose tissue	UBERON:0002190	36.85	silver quality
hypothalamus	UBERON:0001898	33.36	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.