LINC01955

Summary

LINC01955 (long intergenic non-protein coding RNA 1955, HGNC:52780) is a long non-coding RNA gene on chromosome 2p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52780
Approved symbol	LINC01955
Name	long intergenic non-protein coding RNA 1955
Location	2p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000281477
Ensembl biotype	lncRNA
Entrez	105374847
RNAcentral	URS0002A50093 — lncRNA, 898 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000626392

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000626392 — 2 exons

Exon	Start	End
ENSE00004280129	87249072	87249711
ENSE00004280130	87253576	87253833

Expression profiles

Bgee: expression breadth broad, 43 present calls, max score 54.42.

Top tissues by expression

43 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
heart left ventricle	UBERON:0002084	54.42	gold quality
calcaneal tendon	UBERON:0003701	51.56	silver quality
esophagus mucosa	UBERON:0002469	50.58	gold quality
blood	UBERON:0000178	50.37	silver quality
prefrontal cortex	UBERON:0000451	50.36	gold quality
body of pancreas	UBERON:0001150	49.75	gold quality
superior frontal gyrus	UBERON:0002661	48.20	gold quality
muscle of leg	UBERON:0001383	47.90	gold quality
islet of Langerhans	UBERON:0000006	47.03	gold quality
kidney	UBERON:0002113	46.51	silver quality
Ammon’s horn	UBERON:0001954	45.27	gold quality
left testis	UBERON:0004533	44.62	gold quality
gastrocnemius	UBERON:0001388	44.36	silver quality
cortex of kidney	UBERON:0001225	44.23	silver quality
Brodmann (1909) area 9	UBERON:0013540	43.90	silver quality
testis	UBERON:0000473	43.74	gold quality
omental fat pad	UBERON:0010414	43.30	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	42.01	silver quality
amygdala	UBERON:0001876	41.75	silver quality
fundus of stomach	UBERON:0001160	41.62	silver quality
right testis	UBERON:0004534	41.26	gold quality
tibial artery	UBERON:0007610	41.10	silver quality
right lobe of thyroid gland	UBERON:0001119	40.75	silver quality
subcutaneous adipose tissue	UBERON:0002190	40.68	silver quality
nucleus accumbens	UBERON:0001882	39.96	silver quality
ascending aorta	UBERON:0001496	39.71	silver quality
thyroid gland	UBERON:0002046	39.68	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	39.67	silver quality
left lobe of thyroid gland	UBERON:0001120	39.41	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	39.26	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.