LINC01958

Summary

LINC01958 (long intergenic non-protein coding RNA 1958, HGNC:52784) is a long non-coding RNA gene on chromosome 2q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52784
Approved symbol	LINC01958
Name	long intergenic non-protein coding RNA 1958
Location	2q24.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.85
Ensembl gene	ENSG00000283436
Ensembl biotype	lncRNA
Entrez	105373708
RNAcentral	URS0000A9F786 — lncRNA, 1941 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000637749, ENST00000833151, ENST00000833152

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000637749 — 5 exons

Exon	Start	End
ENSE00003796354	156659373	156659413
ENSE00003797609	156655224	156655348
ENSE00003799905	156666583	156666671
ENSE00003800247	156694011	156695659
ENSE00003801015	156693179	156693215

Expression profiles

Bgee: expression breadth tissue_specific, 10 present calls, max score 80.16.

Top tissues by expression

10 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.16	silver quality
liver	UBERON:0002107	52.27	gold quality
right lobe of liver	UBERON:0001114	42.99	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	42.61	gold quality
esophagus	UBERON:0001043	41.06	silver quality
vagina	UBERON:0000996	40.90	silver quality
esophagus mucosa	UBERON:0002469	40.05	silver quality
testis	UBERON:0000473	29.00	silver quality
left testis	UBERON:0004533	28.20	silver quality
right testis	UBERON:0004534	27.97	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.