LINC01981

Summary

LINC01981 (long intergenic non-protein coding RNA 1981, HGNC:52809) is a long non-coding RNA gene on chromosome 3p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52809
Approved symbol	LINC01981
Name	long intergenic non-protein coding RNA 1981
Location	3p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229243
Ensembl biotype	lncRNA
Entrez	100996624
RNAcentral	URS00008E3A37 — lncRNA, 2842 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000432163, ENST00000656488, ENST00000665921, ENST00000667872

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000432163 — 2 exons

Exon	Start	End
ENSE00001669235	27830888	27833582
ENSE00001709161	27833999	27834136

Expression profiles

Bgee: expression breadth broad, 18 present calls, max score 92.08.

Top tissues by expression

159 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	92.08	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.27	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.34	gold quality
right testis	UBERON:0004534	58.00	gold quality
left testis	UBERON:0004533	57.46	gold quality
testis	UBERON:0000473	56.16	gold quality
muscle of leg	UBERON:0001383	52.76	gold quality
monocyte	CL:0000576	52.27	silver quality
gastrocnemius	UBERON:0001388	50.90	gold quality
buccal mucosa cell	CL:0002336	50.60	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.53	gold quality
heart left ventricle	UBERON:0002084	44.20	silver quality
cardiac ventricle	UBERON:0002082	43.55	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
heart	UBERON:0000948	42.99	gold quality
anatomical system	UBERON:0000467	42.80	gold quality
material anatomical entity	UBERON:0000465	42.76	gold quality
multicellular organism	UBERON:0000468	42.63	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
upper leg skin	UBERON:0004262	42.48	silver quality
cortex of kidney	UBERON:0001225	41.96	gold quality
skeletal muscle tissue	UBERON:0001134	41.76	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
kidney	UBERON:0002113	41.37	gold quality
prefrontal cortex	UBERON:0000451	41.35	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.