LINC02003

Summary

LINC02003 (long intergenic non-protein coding RNA 2003, HGNC:27099) is a long non-coding RNA gene on chromosome 17q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27099
Approved symbol	LINC02003
Name	long intergenic non-protein coding RNA 2003
Location	17q24.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000264026
Ensembl biotype	lncRNA
Entrez	146795
RNAcentral	URS0000A771EF — lncRNA, 1962 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000577573, ENST00000656431, ENST00000663290, ENST00000664653

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000577573 — 4 exons

Exon	Start	End
ENSE00002696612	72354905	72355136
ENSE00002701719	72354007	72354227
ENSE00002715026	72353730	72353906
ENSE00002734449	72342940	72344142

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 64.54.

Top tissues by expression

176 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	64.54	gold quality
buccal mucosa cell	CL:0002336	59.78	gold quality
ganglionic eminence	UBERON:0004023	59.35	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	55.84	gold quality
monocyte	CL:0000576	55.51	gold quality
cortical plate	UBERON:0005343	53.78	silver quality
prefrontal cortex	UBERON:0000451	51.32	gold quality
right testis	UBERON:0004534	49.54	gold quality
left testis	UBERON:0004533	48.96	gold quality
testis	UBERON:0000473	48.13	gold quality
islet of Langerhans	UBERON:0000006	46.35	silver quality
uterine cervix	UBERON:0000002	45.56	gold quality
skin of hip	UBERON:0001554	45.20	silver quality
frontal cortex	UBERON:0001870	44.98	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	44.58	silver quality
body of stomach	UBERON:0001161	44.56	gold quality
right lobe of thyroid gland	UBERON:0001119	44.35	silver quality
right hemisphere of cerebellum	UBERON:0014890	44.28	gold quality
neocortex	UBERON:0001950	44.18	silver quality
aorta	UBERON:0000947	43.80	gold quality
body of pancreas	UBERON:0001150	43.64	silver quality
amniotic fluid	UBERON:0000173	43.56	gold quality
cerebellar hemisphere	UBERON:0002245	43.48	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
putamen	UBERON:0001874	42.88	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
stomach	UBERON:0000945	42.50	gold quality
esophagus mucosa	UBERON:0002469	42.47	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.43	silver quality
cerebral cortex	UBERON:0000956	42.10	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.