LINC02013

Summary

LINC02013 (long intergenic non-protein coding RNA 2013, HGNC:52848) is a long non-coding RNA gene on chromosome 3q28.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52848
Approved symbol	LINC02013
Name	long intergenic non-protein coding RNA 2013
Location	3q28
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228730
Ensembl biotype	lncRNA
Entrez	105374272
RNAcentral	URS00026A24DE — lncRNA, 970 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000438156, ENST00000658848, ENST00000665139, ENST00000668289

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000438156 — 2 exons

Exon	Start	End
ENSE00001601070	190697923	190698150
ENSE00001674081	190698551	190698848

Expression profiles

Bgee: expression breadth ubiquitous, 109 present calls, max score 84.07.

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.07	gold quality
calcaneal tendon	UBERON:0003701	74.41	gold quality
corpus callosum	UBERON:0002336	73.68	gold quality
adrenal tissue	UBERON:0018303	73.28	gold quality
sural nerve	UBERON:0015488	68.52	gold quality
cortical plate	UBERON:0005343	63.65	gold quality
liver	UBERON:0002107	61.26	gold quality
blood	UBERON:0000178	61.24	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.57	gold quality
ganglionic eminence	UBERON:0004023	60.07	gold quality
kidney	UBERON:0002113	58.96	gold quality
primary visual cortex	UBERON:0002436	57.01	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	56.51	gold quality
monocyte	CL:0000576	55.32	gold quality
adult mammalian kidney	UBERON:0000082	54.79	gold quality
cortex of kidney	UBERON:0001225	53.82	gold quality
superior frontal gyrus	UBERON:0002661	53.17	gold quality
lymph node	UBERON:0000029	52.27	gold quality
muscle of leg	UBERON:0001383	51.45	gold quality
islet of Langerhans	UBERON:0000006	51.31	gold quality
left testis	UBERON:0004533	50.39	gold quality
testis	UBERON:0000473	50.10	gold quality
prefrontal cortex	UBERON:0000451	49.80	gold quality
right lobe of liver	UBERON:0001114	49.73	gold quality
ectocervix	UBERON:0012249	49.73	gold quality
right testis	UBERON:0004534	49.18	gold quality
stomach	UBERON:0000945	49.16	gold quality
lung	UBERON:0002048	48.74	gold quality
endometrium	UBERON:0001295	48.50	gold quality
gastrocnemius	UBERON:0001388	48.07	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.