LINC02017

Summary

LINC02017 (long intergenic non-protein coding RNA 2017, HGNC:52852) is a long non-coding RNA gene on chromosome 3p14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52852
Approved symbol	LINC02017
Name	long intergenic non-protein coding RNA 2017
Location	3p14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000243572
Ensembl biotype	lncRNA
Entrez	105377096
RNAcentral	URS00002DD038 — lncRNA, 474 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000496829

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000496829 — 3 exons

Exon	Start	End
ENSE00001814597	55186718	55186827
ENSE00001844601	55178172	55178416
ENSE00001932986	55189096	55189214

Expression profiles

Bgee: expression breadth broad, 48 present calls, max score 88.27.

Top tissues by expression

48 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.27	silver quality
tibial nerve	UBERON:0001323	67.73	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	64.01	gold quality
islet of Langerhans	UBERON:0000006	60.14	gold quality
myometrium	UBERON:0001296	59.20	gold quality
smooth muscle tissue	UBERON:0001135	57.87	gold quality
prefrontal cortex	UBERON:0000451	57.67	gold quality
endometrium	UBERON:0001295	56.46	silver quality
monocyte	CL:0000576	56.33	gold quality
thoracic mammary gland	UBERON:0005200	54.17	gold quality
skin of abdomen	UBERON:0001416	53.39	gold quality
skin of leg	UBERON:0001511	52.51	gold quality
heart left ventricle	UBERON:0002084	48.96	gold quality
blood	UBERON:0000178	48.16	silver quality
subcutaneous adipose tissue	UBERON:0002190	48.16	gold quality
cerebellar hemisphere	UBERON:0002245	47.06	silver quality
gastrocnemius	UBERON:0001388	46.89	silver quality
tibial artery	UBERON:0007610	46.70	gold quality
minor salivary gland	UBERON:0001830	45.56	gold quality
body of pancreas	UBERON:0001150	45.27	silver quality
body of stomach	UBERON:0001161	44.73	gold quality
body of uterus	UBERON:0009853	44.49	gold quality
putamen	UBERON:0001874	44.17	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	43.85	silver quality
lower esophagus muscularis layer	UBERON:0035833	43.76	gold quality
right atrium auricular region	UBERON:0006631	43.33	gold quality
esophagus mucosa	UBERON:0002469	43.08	gold quality
anterior cingulate cortex	UBERON:0009835	41.50	gold quality
vagina	UBERON:0000996	41.03	silver quality
omental fat pad	UBERON:0010414	40.92	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.