LINC02025

Summary

LINC02025 (long intergenic non-protein coding RNA 2025, HGNC:52860) is a long non-coding RNA gene on chromosome 3p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52860
Approved symbol	LINC02025
Name	long intergenic non-protein coding RNA 2025
Location	3p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000242339
Ensembl biotype	lncRNA
Entrez	105377192
RNAcentral	URS0000EF4DEF — lncRNA, 392 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000488348, ENST00000661831

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000488348 — 3 exons

Exon	Start	End
ENSE00001826943	84892932	84892965
ENSE00001912618	84893242	84893379
ENSE00001951992	84884936	84885123

Expression profiles

Bgee: expression breadth broad, 96 present calls, max score 88.86.

Top tissues by expression

96 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.86	gold quality
ganglionic eminence	UBERON:0004023	65.37	gold quality
corpus callosum	UBERON:0002336	64.82	gold quality
cortex of kidney	UBERON:0001225	63.59	gold quality
bone marrow	UBERON:0002371	63.56	gold quality
gall bladder	UBERON:0002110	60.75	gold quality
rectum	UBERON:0001052	60.54	gold quality
duodenum	UBERON:0002114	59.26	gold quality
vermiform appendix	UBERON:0001154	58.92	gold quality
monocyte	CL:0000576	58.13	gold quality
prefrontal cortex	UBERON:0000451	56.40	gold quality
islet of Langerhans	UBERON:0000006	54.76	gold quality
blood	UBERON:0000178	54.45	gold quality
adult mammalian kidney	UBERON:0000082	54.17	gold quality
primary visual cortex	UBERON:0002436	54.12	gold quality
gastrocnemius	UBERON:0001388	53.79	gold quality
left coronary artery	UBERON:0001626	53.28	gold quality
calcaneal tendon	UBERON:0003701	52.93	gold quality
liver	UBERON:0002107	51.65	silver quality
right testis	UBERON:0004534	50.71	gold quality
mucosa of stomach	UBERON:0001199	50.68	gold quality
pancreas	UBERON:0001264	50.27	gold quality
left adrenal gland cortex	UBERON:0035825	49.83	gold quality
ectocervix	UBERON:0012249	49.81	gold quality
Brodmann (1909) area 9	UBERON:0013540	49.71	gold quality
testis	UBERON:0000473	49.65	gold quality
heart left ventricle	UBERON:0002084	49.47	gold quality
left adrenal gland	UBERON:0001234	49.26	gold quality
left testis	UBERON:0004533	49.20	gold quality
adrenal tissue	UBERON:0018303	48.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.