LINC02032

Summary

LINC02032 (long intergenic non-protein coding RNA 2032, HGNC:52866) is a long non-coding RNA gene on chromosome 3q24.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52866
Approved symbol	LINC02032
Name	long intergenic non-protein coding RNA 2032
Location	3q24
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000241131
Ensembl biotype	lncRNA
Entrez	100507461
RNAcentral	URS0000A76764 — lncRNA, 405 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 23 — 23 lncRNA

ENST00000470219, ENST00000476987, ENST00000477153, ENST00000490465, ENST00000650594, ENST00000655212, ENST00000656355, ENST00000658346, ENST00000660174, ENST00000660712, ENST00000668651, ENST00000733533, ENST00000733534, ENST00000733535, ENST00000733536, ENST00000733537, ENST00000733538, ENST00000733539, ENST00000733540, ENST00000733541, ENST00000733846, ENST00000733847, ENST00000733937

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000470219 — 3 exons

Exon	Start	End
ENSE00001826032	148226377	148226606
ENSE00001833215	148195949	148196047
ENSE00001880037	148191719	148191765

Expression profiles

Bgee: expression breadth broad, 85 present calls, max score 89.89.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0551 / max 49.8172, expressed in 14 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
39064	0.0376	7
39065	0.0176	5

Top tissues by expression

205 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.89	gold quality
buccal mucosa cell	CL:0002336	87.96	gold quality
left testis	UBERON:0004533	85.89	gold quality
right testis	UBERON:0004534	84.54	gold quality
sperm	CL:0000019	83.92	gold quality
testis	UBERON:0000473	83.09	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	76.01	gold quality
cerebellar hemisphere	UBERON:0002245	73.21	gold quality
right hemisphere of cerebellum	UBERON:0014890	73.18	gold quality
cerebellar cortex	UBERON:0002129	73.17	gold quality
cerebellum	UBERON:0002037	71.39	gold quality
tibialis anterior	UBERON:0001385	65.93	silver quality
ganglionic eminence	UBERON:0004023	60.88	gold quality
muscle of leg	UBERON:0001383	59.13	gold quality
deltoid	UBERON:0001476	57.93	gold quality
adult organism	UBERON:0007023	57.27	gold quality
gastrocnemius	UBERON:0001388	57.16	gold quality
upper lobe of lung	UBERON:0008948	56.64	silver quality
lower lobe of lung	UBERON:0008949	56.43	silver quality
cardiac muscle of right atrium	UBERON:0003379	55.71	gold quality
pancreatic ductal cell	CL:0002079	55.50	silver quality
body of pancreas	UBERON:0001150	55.25	gold quality
adrenal tissue	UBERON:0018303	55.01	gold quality
cortical plate	UBERON:0005343	54.91	silver quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
epithelial cell of pancreas	CL:0000083	54.10	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
prefrontal cortex	UBERON:0000451	53.52	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.