LINC02037

Summary

LINC02037 (long intergenic non-protein coding RNA 2037, HGNC:52877) is a long non-coding RNA gene on chromosome 3q29.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52877
Approved symbol	LINC02037
Name	long intergenic non-protein coding RNA 2037
Location	3q29
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238097
Ensembl biotype	lncRNA
Entrez	101929337
RNAcentral	URS0000271767 — lncRNA, 1195 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 22 — 22 lncRNA

ENST00000455821, ENST00000664340, ENST00000669096, ENST00000688193, ENST00000688994, ENST00000689960, ENST00000691562, ENST00000693372, ENST00000794922, ENST00000794923, ENST00000794924, ENST00000794925, ENST00000794926, ENST00000794927, ENST00000794928, ENST00000794929, ENST00000794930, ENST00000794931, ENST00000794932, ENST00000794933, ENST00000794934, ENST00000794935

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455821 — 4 exons

Exon	Start	End
ENSE00001687590	194247648	194247821
ENSE00001692902	194249596	194249902
ENSE00001711367	194257185	194257772
ENSE00001776033	194255231	194255356

Expression profiles

Bgee: expression breadth broad, 90 present calls, max score 79.67.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0617 / max 20.5803, expressed in 7 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
40646	0.0617	7

Top tissues by expression

90 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right lobe of liver	UBERON:0001114	79.67	gold quality
liver	UBERON:0002107	77.85	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.47	gold quality
testis	UBERON:0000473	59.70	gold quality
placenta	UBERON:0001987	57.90	gold quality
ganglionic eminence	UBERON:0004023	56.65	silver quality
cortex of kidney	UBERON:0001225	52.89	gold quality
blood	UBERON:0000178	52.23	gold quality
bone marrow	UBERON:0002371	51.69	silver quality
endometrium	UBERON:0001295	51.41	silver quality
prefrontal cortex	UBERON:0000451	49.22	gold quality
small intestine	UBERON:0002108	49.20	gold quality
monocyte	CL:0000576	49.12	silver quality
lymph node	UBERON:0000029	48.36	silver quality
duodenum	UBERON:0002114	47.79	silver quality
kidney	UBERON:0002113	47.78	silver quality
islet of Langerhans	UBERON:0000006	46.94	gold quality
pancreas	UBERON:0001264	46.38	gold quality
multicellular organism	UBERON:0000468	46.14	gold quality
muscle of leg	UBERON:0001383	45.99	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	45.99	silver quality
urinary bladder	UBERON:0001255	45.69	gold quality
vermiform appendix	UBERON:0001154	45.47	silver quality
right lobe of thyroid gland	UBERON:0001119	45.37	gold quality
gall bladder	UBERON:0002110	45.34	gold quality
smooth muscle tissue	UBERON:0001135	45.06	silver quality
gastrocnemius	UBERON:0001388	44.64	silver quality
prostate gland	UBERON:0002367	44.60	silver quality
heart	UBERON:0000948	43.88	silver quality
amygdala	UBERON:0001876	43.87	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.