LINC02043

Summary

LINC02043 (long intergenic non-protein coding RNA 2043, HGNC:52883) is a long non-coding RNA gene on chromosome 3q27.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52883
Approved symbol	LINC02043
Name	long intergenic non-protein coding RNA 2043
Location	3q27.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232233
Ensembl biotype	lncRNA
Entrez	102724699
RNAcentral	URS00004FA0FF — lncRNA, 1832 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000419745, ENST00000806335, ENST00000806336, ENST00000806337, ENST00000806338, ENST00000806339, ENST00000806340, ENST00000806341, ENST00000806342

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419745 — 4 exons

Exon	Start	End
ENSE00001670359	186824442	186824712
ENSE00001701296	186825307	186825521
ENSE00001705150	186810880	186812148
ENSE00001789589	186823545	186823621

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 81.80.

Top tissues by expression

195 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endothelial cell	CL:0000115	81.80	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.66	silver quality
bone marrow cell	CL:0002092	79.43	gold quality
colonic epithelium	UBERON:0000397	76.98	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.60	silver quality
secondary oocyte	CL:0000655	74.75	silver quality
sural nerve	UBERON:0015488	74.68	gold quality
parotid gland	UBERON:0001831	74.56	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	73.36	silver quality
right frontal lobe	UBERON:0002810	70.52	gold quality
skeletal muscle tissue	UBERON:0001134	70.45	silver quality
muscle tissue	UBERON:0002385	70.17	silver quality
primary visual cortex	UBERON:0002436	68.74	gold quality
anterior cingulate cortex	UBERON:0009835	67.69	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	67.42	gold quality
upper leg skin	UBERON:0004262	67.07	gold quality
deltoid	UBERON:0001476	66.81	silver quality
Brodmann (1909) area 23	UBERON:0013554	66.77	silver quality
nasal cavity epithelium	UBERON:0005384	66.34	gold quality
Brodmann (1909) area 9	UBERON:0013540	65.96	gold quality
occipital lobe	UBERON:0002021	64.95	gold quality
neocortex	UBERON:0001950	63.77	gold quality
cerebral cortex	UBERON:0000956	63.72	gold quality
skin of hip	UBERON:0001554	62.77	gold quality
frontal cortex	UBERON:0001870	62.49	gold quality
right hemisphere of cerebellum	UBERON:0014890	62.43	gold quality
bone marrow	UBERON:0002371	62.25	silver quality
pigmented layer of retina	UBERON:0001782	62.06	gold quality
tibia	UBERON:0000979	62.04	silver quality
myocardium	UBERON:0002349	62.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.