LINC02051

Summary

LINC02051 (long intergenic non-protein coding RNA 2051, HGNC:52891) is a long non-coding RNA gene on chromosome 3q27.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52891
Approved symbol	LINC02051
Name	long intergenic non-protein coding RNA 2051
Location	3q27.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226859
Ensembl biotype	lncRNA
Entrez	107986165
RNAcentral	URS0000386D2B — lncRNA, 690 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000456535

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000456535 — 2 exons

Exon	Start	End
ENSE00001743556	186476727	186477130
ENSE00001761039	186478085	186478370

Expression profiles

Bgee: expression breadth broad, 64 present calls, max score 87.75.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1010 / max 11.2414, expressed in 38 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
40264	0.0514	28
40263	0.0495	24

Top tissues by expression

69 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow	UBERON:0002371	87.75	silver quality
thymus	UBERON:0002370	74.91	silver quality
prostate gland	UBERON:0002367	71.20	silver quality
liver	UBERON:0002107	69.48	gold quality
quadriceps femoris	UBERON:0001377	69.42	gold quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
skeletal muscle tissue	UBERON:0001134	67.14	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.72	gold quality
sural nerve	UBERON:0015488	61.66	gold quality
monocyte	CL:0000576	55.00	gold quality
prefrontal cortex	UBERON:0000451	54.32	gold quality
cortex of kidney	UBERON:0001225	51.26	silver quality
subcutaneous adipose tissue	UBERON:0002190	49.93	silver quality
colon	UBERON:0001155	48.27	gold quality
superior frontal gyrus	UBERON:0002661	47.86	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	47.73	gold quality
fallopian tube	UBERON:0003889	47.66	gold quality
blood	UBERON:0000178	47.41	gold quality
adipose tissue	UBERON:0001013	47.06	silver quality
gall bladder	UBERON:0002110	46.78	gold quality
frontal cortex	UBERON:0001870	46.66	gold quality
transverse colon	UBERON:0001157	46.37	gold quality
cerebellum	UBERON:0002037	46.34	silver quality
cerebellar cortex	UBERON:0002129	46.01	silver quality
cerebellar hemisphere	UBERON:0002245	45.72	silver quality
small intestine	UBERON:0002108	45.61	gold quality
placenta	UBERON:0001987	45.40	gold quality
gastrocnemius	UBERON:0001388	44.98	silver quality
corpus callosum	UBERON:0002336	44.96	silver quality
lower esophagus muscularis layer	UBERON:0035833	44.86	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.