LINC02052

Summary

LINC02052 (long intergenic non-protein coding RNA 2052, HGNC:27372) is a long non-coding RNA gene on chromosome 3q27.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27372
Approved symbol	LINC02052
Name	long intergenic non-protein coding RNA 2052
Location	3q27.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224406
Ensembl biotype	lncRNA
Entrez	253573
RNAcentral	URS000075A988 — lncRNA, 2295 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000427474, ENST00000427914, ENST00000441169, ENST00000458099, ENST00000653537, ENST00000654350, ENST00000662825, ENST00000664389, ENST00000664567, ENST00000664591, ENST00000666408, ENST00000666843, ENST00000667213, ENST00000669782, ENST00000671324, ENST00000723196, ENST00000723197, ENST00000723198

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000427474 — 7 exons

Exon	Start	End
ENSE00001633303	186454982	186455174
ENSE00001699816	186457341	186457630
ENSE00001711263	186455648	186455773
ENSE00001754815	186455988	186456045
ENSE00001780397	186456397	186456546
ENSE00003867110	186458085	186458510
ENSE00003878303	186456164	186456257

Expression profiles

Bgee: expression breadth broad, 34 present calls, max score 72.30.

Top tissues by expression

160 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	72.30	silver quality
right testis	UBERON:0004534	64.96	gold quality
left testis	UBERON:0004533	64.57	gold quality
testis	UBERON:0000473	62.22	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.02	silver quality
upper lobe of lung	UBERON:0008948	56.12	silver quality
lower lobe of lung	UBERON:0008949	55.66	silver quality
monocyte	CL:0000576	50.79	silver quality
adenohypophysis	UBERON:0002196	49.62	gold quality
muscle of leg	UBERON:0001383	48.26	gold quality
gastrocnemius	UBERON:0001388	46.59	gold quality
cerebellar cortex	UBERON:0002129	46.35	silver quality
gall bladder	UBERON:0002110	46.07	silver quality
pituitary gland	UBERON:0000007	43.49	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
anatomical system	UBERON:0000467	43.36	gold quality
material anatomical entity	UBERON:0000465	43.20	gold quality
multicellular organism	UBERON:0000468	43.13	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
buccal mucosa cell	CL:0002336	42.39	gold quality
right frontal lobe	UBERON:0002810	42.22	gold quality
left ovary	UBERON:0002119	42.08	silver quality
tibial artery	UBERON:0007610	41.80	silver quality
tendon	UBERON:0000043	41.71	gold quality
urinary bladder	UBERON:0001255	41.57	silver quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
body of pancreas	UBERON:0001150	41.34	silver quality
superficial temporal artery	UBERON:0001614	41.33	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.