LINC02058

Summary

LINC02058 (long intergenic non-protein coding RNA 2058, HGNC:52901) is a long non-coding RNA gene on chromosome 5q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52901
Approved symbol	LINC02058
Name	long intergenic non-protein coding RNA 2058
Location	5q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248528
Ensembl biotype	lncRNA
Entrez	107984117
RNAcentral	URS00002DD291 — lncRNA, 707 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000507491, ENST00000766746

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000507491 — 4 exons

Exon	Start	End
ENSE00001898578	92913719	92913885
ENSE00002047394	92914006	92914135
ENSE00002053229	92907180	92907468
ENSE00002079356	92939471	92939591

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 64.07.

Top tissues by expression

78 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tonsil	UBERON:0002372	64.07	gold quality
ganglionic eminence	UBERON:0004023	63.57	gold quality
islet of Langerhans	UBERON:0000006	56.05	gold quality
saliva-secreting gland	UBERON:0001044	55.14	gold quality
lymph node	UBERON:0000029	54.17	gold quality
prefrontal cortex	UBERON:0000451	53.32	gold quality
monocyte	CL:0000576	52.68	gold quality
primary visual cortex	UBERON:0002436	51.95	silver quality
gall bladder	UBERON:0002110	50.91	gold quality
omental fat pad	UBERON:0010414	50.53	gold quality
blood	UBERON:0000178	50.06	gold quality
endometrium	UBERON:0001295	50.00	gold quality
adult mammalian kidney	UBERON:0000082	49.96	gold quality
muscle of leg	UBERON:0001383	49.82	gold quality
cortex of kidney	UBERON:0001225	49.65	silver quality
substantia nigra	UBERON:0002038	49.50	gold quality
kidney	UBERON:0002113	49.17	gold quality
frontal cortex	UBERON:0001870	48.74	gold quality
gastrocnemius	UBERON:0001388	48.57	gold quality
hypothalamus	UBERON:0001898	48.02	gold quality
left adrenal gland cortex	UBERON:0035825	47.25	gold quality
rectum	UBERON:0001052	46.97	gold quality
body of pancreas	UBERON:0001150	46.45	gold quality
adrenal gland	UBERON:0002369	46.12	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	45.83	gold quality
brain	UBERON:0000955	45.77	gold quality
multicellular organism	UBERON:0000468	45.72	gold quality
corpus callosum	UBERON:0002336	45.67	silver quality
left adrenal gland	UBERON:0001234	45.60	gold quality
cerebral cortex	UBERON:0000956	45.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.78

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.