LINC02069

Summary

LINC02069 (long intergenic non-protein coding RNA 2069, HGNC:52915) is a long non-coding RNA gene on chromosome 3q27.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52915
Approved symbol	LINC02069
Name	long intergenic non-protein coding RNA 2069
Location	3q27.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229433
Ensembl biotype	lncRNA
Entrez	101928992
RNAcentral	URS000075EEC7 — lncRNA, 2606 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000457449, ENST00000657359, ENST00000665196, ENST00000842002, ENST00000842003

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457449 — 3 exons

Exon	Start	End
ENSE00001639099	184756389	184758653
ENSE00001699586	184772980	184773155
ENSE00001803733	184765320	184765469

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 59.55.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	59.55	gold quality
skeletal muscle tissue	UBERON:0001134	52.93	silver quality
monocyte	CL:0000576	48.33	silver quality
prefrontal cortex	UBERON:0000451	48.29	gold quality
liver	UBERON:0002107	47.15	gold quality
myometrium	UBERON:0001296	47.07	gold quality
muscle of leg	UBERON:0001383	46.60	silver quality
lymph node	UBERON:0000029	46.51	silver quality
placenta	UBERON:0001987	46.32	silver quality
cortex of kidney	UBERON:0001225	46.21	silver quality
calcaneal tendon	UBERON:0003701	46.14	silver quality
body of pancreas	UBERON:0001150	45.71	gold quality
superior frontal gyrus	UBERON:0002661	45.67	silver quality
gastrocnemius	UBERON:0001388	45.44	silver quality
smooth muscle tissue	UBERON:0001135	45.09	gold quality
corpus callosum	UBERON:0002336	45.09	silver quality
blood	UBERON:0000178	44.59	silver quality
heart left ventricle	UBERON:0002084	44.54	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	44.39	silver quality
heart	UBERON:0000948	44.37	silver quality
frontal cortex	UBERON:0001870	44.06	silver quality
body of stomach	UBERON:0001161	43.59	gold quality
cerebellar cortex	UBERON:0002129	43.56	silver quality
left adrenal gland cortex	UBERON:0035825	43.32	gold quality
right hemisphere of cerebellum	UBERON:0014890	43.25	silver quality
stomach	UBERON:0000945	43.22	silver quality
cerebellar hemisphere	UBERON:0002245	43.19	silver quality
lung	UBERON:0002048	42.92	silver quality
adult mammalian kidney	UBERON:0000082	42.76	gold quality
putamen	UBERON:0001874	42.46	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.