LINC02071

Summary

LINC02071 (long intergenic non-protein coding RNA 2071, HGNC:52917) is a long non-coding RNA gene on chromosome 17q21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52917
Approved symbol	LINC02071
Name	long intergenic non-protein coding RNA 2071
Location	17q21.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249383
Ensembl biotype	lncRNA
Entrez	101927274
RNAcentral	URS000075C28C — lncRNA, 1735 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000514726, ENST00000649531

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514726 — 6 exons

Exon	Start	End
ENSE00002023445	51312609	51312784
ENSE00002028563	51334346	51335165
ENSE00002030542	51321586	51321676
ENSE00002042254	51333000	51333128
ENSE00002071087	51333712	51334118
ENSE00002074335	51323633	51323732

Expression profiles

Bgee: expression breadth broad, 69 present calls, max score 78.29.

Top tissues by expression

172 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	78.29	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.64	gold quality
buccal mucosa cell	CL:0002336	69.53	gold quality
myocardium	UBERON:0002349	63.68	gold quality
vena cava	UBERON:0004087	61.85	gold quality
ventricular zone	UBERON:0003053	61.28	gold quality
tendon	UBERON:0000043	60.04	gold quality
tendon of biceps brachii	UBERON:0008188	59.95	gold quality
gingival epithelium	UBERON:0001949	59.76	gold quality
cardia of stomach	UBERON:0001162	58.27	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.16	gold quality
gingiva	UBERON:0001828	57.74	gold quality
deltoid	UBERON:0001476	57.17	gold quality
ganglionic eminence	UBERON:0004023	56.83	gold quality
mucosa of sigmoid colon	UBERON:0004993	56.31	gold quality
sperm	CL:0000019	55.24	gold quality
body of tongue	UBERON:0011876	55.11	gold quality
Brodmann (1909) area 23	UBERON:0013554	54.39	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.35	silver quality
tonsil	UBERON:0002372	54.24	gold quality
metanephros	UBERON:0000081	53.83	gold quality
tongue	UBERON:0001723	53.48	gold quality
colonic mucosa	UBERON:0000317	53.34	gold quality
vastus lateralis	UBERON:0001379	53.33	gold quality
quadriceps femoris	UBERON:0001377	53.30	gold quality
urethra	UBERON:0000057	53.14	gold quality
skeletal muscle tissue	UBERON:0001134	53.14	gold quality
synovial joint	UBERON:0002217	53.13	gold quality
primary visual cortex	UBERON:0002436	53.11	gold quality
layer of synovial tissue	UBERON:0007616	53.07	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.