LINC02072

Summary

LINC02072 (long intergenic non-protein coding RNA 2072, HGNC:52918) is a long non-coding RNA gene on chromosome 17q21.33.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52918
Approved symbol	LINC02072
Name	long intergenic non-protein coding RNA 2072
Location	17q21.33
Locus type	RNA, long non-coding
Status	Approved
Entrez	440446
RNAcentral	URS00005E845C — lncRNA, 2645 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000050363 (17:51337522 G>C), RS1000387841 (17:51340858 C>T), RS1000656067 (17:51339128 C>A,T), RS1001617183 (17:51340422 T>C), RS1002027888 (17:51342070 A>C), RS1002041688 (17:51339745 CTGATTTT>C), RS1002621706 (17:51339093 G>A,C), RS1003072246 (17:51339365 T>C), RS1004138405 (17:51335656 G>A), RS1004200515 (17:51335418 C>A,T), RS1004398016 (17:51341498 A>C), RS1004431257 (17:51335555 A>G), RS1004606531 (17:51341715 T>C), RS1005456643 (17:51336520 A>G), RS1006356896 (17:51339035 G>T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

3 total (human), top 3 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
bisphenol A	increases expression	1
Leflunomide	increases expression	1
Smoke	increases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.