LINC02077

Summary

LINC02077 (long intergenic non-protein coding RNA 2077, HGNC:52925) is a long non-coding RNA gene on chromosome 3p12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52925
Approved symbol	LINC02077
Name	long intergenic non-protein coding RNA 2077
Location	3p12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000244461
Ensembl biotype	lncRNA
Entrez	105377172
RNAcentral	URS0002A2EB04 — lncRNA, 544 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000465795, ENST00000832021

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000465795 — 3 exons

Exon	Start	End
ENSE00001818247	78042142	78042242
ENSE00004247199	78038695	78038910
ENSE00004247200	78046693	78046919

Expression profiles

Bgee: expression breadth broad, 44 present calls, max score 90.51.

Top tissues by expression

44 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.51	gold quality
prefrontal cortex	UBERON:0000451	60.75	gold quality
blood	UBERON:0000178	60.39	gold quality
sural nerve	UBERON:0015488	59.43	silver quality
islet of Langerhans	UBERON:0000006	55.47	gold quality
lymph node	UBERON:0000029	55.36	gold quality
monocyte	CL:0000576	54.05	gold quality
subcutaneous adipose tissue	UBERON:0002190	53.07	gold quality
skin of leg	UBERON:0001511	51.27	gold quality
endometrium	UBERON:0001295	50.61	silver quality
heart left ventricle	UBERON:0002084	50.43	gold quality
ascending aorta	UBERON:0001496	49.44	gold quality
heart	UBERON:0000948	49.29	gold quality
right testis	UBERON:0004534	48.42	gold quality
tibial nerve	UBERON:0001323	47.48	silver quality
tibial artery	UBERON:0007610	46.23	gold quality
testis	UBERON:0000473	46.21	gold quality
left testis	UBERON:0004533	46.08	gold quality
multicellular organism	UBERON:0000468	45.46	gold quality
right atrium auricular region	UBERON:0006631	45.40	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	45.26	gold quality
Ammon’s horn	UBERON:0001954	44.57	silver quality
esophagus mucosa	UBERON:0002469	43.67	silver quality
muscle layer of sigmoid colon	UBERON:0035805	42.93	gold quality
skin of abdomen	UBERON:0001416	42.29	gold quality
prostate gland	UBERON:0002367	42.22	silver quality
body of stomach	UBERON:0001161	42.20	silver quality
amygdala	UBERON:0001876	41.74	silver quality
putamen	UBERON:0001874	41.44	silver quality
brain	UBERON:0000955	41.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.