LINC02082

Summary

LINC02082 (long intergenic non-protein coding RNA 2082, HGNC:52931) is a long non-coding RNA gene on chromosome 3q26.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52931
Approved symbol	LINC02082
Name	long intergenic non-protein coding RNA 2082
Location	3q26.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000242268
Ensembl biotype	lncRNA
Entrez	100507661
RNAcentral	URS000075C391 — lncRNA, 745 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000484765, ENST00000664865, ENST00000832792, ENST00000832793

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000484765 — 4 exons

Exon	Start	End
ENSE00001865322	168910672	168910814
ENSE00001915665	168921732	168921996
ENSE00001939868	168903366	168903540
ENSE00001949930	168908287	168908413

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 74.06.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.06	gold quality
cortical plate	UBERON:0005343	73.45	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.23	gold quality
pituitary gland	UBERON:0000007	66.85	gold quality
ventricular zone	UBERON:0003053	64.52	gold quality
ganglionic eminence	UBERON:0004023	64.45	gold quality
islet of Langerhans	UBERON:0000006	63.52	gold quality
adenohypophysis	UBERON:0002196	63.21	gold quality
hypothalamus	UBERON:0001898	62.93	gold quality
omental fat pad	UBERON:0010414	59.68	gold quality
caudate nucleus	UBERON:0001873	58.70	gold quality
placenta	UBERON:0001987	58.68	gold quality
nucleus accumbens	UBERON:0001882	58.37	gold quality
prefrontal cortex	UBERON:0000451	57.97	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.32	gold quality
gall bladder	UBERON:0002110	55.85	gold quality
pancreas	UBERON:0001264	55.78	gold quality
brain	UBERON:0000955	55.66	gold quality
monocyte	CL:0000576	55.55	gold quality
skeletal muscle tissue	UBERON:0001134	55.51	silver quality
adipose tissue	UBERON:0001013	55.32	gold quality
superior frontal gyrus	UBERON:0002661	54.84	gold quality
frontal cortex	UBERON:0001870	54.53	gold quality
substantia nigra	UBERON:0002038	54.29	gold quality
anterior cingulate cortex	UBERON:0009835	54.27	gold quality
liver	UBERON:0002107	54.13	gold quality
Brodmann (1909) area 9	UBERON:0013540	53.47	gold quality
cerebral cortex	UBERON:0000956	53.42	gold quality
right hemisphere of cerebellum	UBERON:0014890	52.81	gold quality
Ammon’s horn	UBERON:0001954	52.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.11

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Significance of LINC02082 and LOC105369812 in differentiating papillary thyroid cancer from benign nodules. (PMID:37932992)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.