LINC02098

Summary

LINC02098 (long intergenic non-protein coding RNA 2098, HGNC:52950) is a long non-coding RNA gene on chromosome 11q24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52950
Approved symbol	LINC02098
Name	long intergenic non-protein coding RNA 2098
Location	11q24.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-702B10.1
Ensembl gene	ENSG00000272575
Ensembl biotype	lncRNA
Entrez	105369564
RNAcentral	URS0000BC4413 — lncRNA, 545 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000608492, ENST00000609260, ENST00000650607, ENST00000667926

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000608492 — 4 exons

Exon	Start	End
ENSE00003702570	128208829	128208942
ENSE00003706344	128241278	128241441
ENSE00003706579	128213982	128214096
ENSE00003710435	128211638	128211719

Expression profiles

Bgee: expression breadth broad, 28 present calls, max score 86.20.

Top tissues by expression

28 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.20	gold quality
monocyte	CL:0000576	59.93	gold quality
prefrontal cortex	UBERON:0000451	56.45	gold quality
blood	UBERON:0000178	55.58	gold quality
left testis	UBERON:0004533	50.87	gold quality
testis	UBERON:0000473	50.79	gold quality
right testis	UBERON:0004534	49.82	gold quality
lower esophagus muscularis layer	UBERON:0035833	47.29	gold quality
omental fat pad	UBERON:0010414	45.46	gold quality
thoracic mammary gland	UBERON:0005200	45.00	gold quality
stomach	UBERON:0000945	43.83	silver quality
ascending aorta	UBERON:0001496	43.38	gold quality
nucleus accumbens	UBERON:0001882	42.63	gold quality
subcutaneous adipose tissue	UBERON:0002190	42.15	silver quality
urinary bladder	UBERON:0001255	41.95	silver quality
myometrium	UBERON:0001296	41.83	silver quality
esophagus mucosa	UBERON:0002469	40.91	silver quality
adult mammalian kidney	UBERON:0000082	40.90	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	39.59	silver quality
Ammon’s horn	UBERON:0001954	39.01	silver quality
skin of leg	UBERON:0001511	38.94	silver quality
left ovary	UBERON:0002119	38.86	silver quality
putamen	UBERON:0001874	38.44	silver quality
anterior cingulate cortex	UBERON:0009835	36.25	silver quality
thyroid gland	UBERON:0002046	35.35	silver quality
left lobe of thyroid gland	UBERON:0001120	35.33	silver quality
adenohypophysis	UBERON:0002196	34.23	silver quality
prostate gland	UBERON:0002367	34.16	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.