LINC02102

Summary

LINC02102 (long intergenic non-protein coding RNA 2102, HGNC:52957) is a long non-coding RNA gene on chromosome 5p15.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52957
Approved symbol	LINC02102
Name	long intergenic non-protein coding RNA 2102
Location	5p15.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248677
Ensembl biotype	lncRNA
Entrez	100505625
RNAcentral	URS00005ACFEB — lncRNA, 3364 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000503989, ENST00000514788, ENST00000664592, ENST00000667865, ENST00000720229, ENST00000720230, ENST00000720231, ENST00000720232, ENST00000720233, ENST00000720234, ENST00000720235, ENST00000720236, ENST00000720237

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503989 — 3 exons

Exon	Start	End
ENSE00002041186	6702558	6702709
ENSE00002059022	6686325	6686932
ENSE00002071199	6705108	6707711

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 68.78.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	68.78	gold quality
stromal cell of endometrium	CL:0002255	63.45	gold quality
left ovary	UBERON:0002119	61.05	gold quality
ovary	UBERON:0000992	60.59	gold quality
right ovary	UBERON:0002118	59.81	gold quality
pituitary gland	UBERON:0000007	59.64	gold quality
ascending aorta	UBERON:0001496	58.70	gold quality
bone marrow	UBERON:0002371	58.70	gold quality
descending thoracic aorta	UBERON:0002345	58.63	gold quality
thoracic aorta	UBERON:0001515	58.40	gold quality
adenohypophysis	UBERON:0002196	58.31	gold quality
myometrium	UBERON:0001296	57.37	gold quality
endocervix	UBERON:0000458	56.92	gold quality
body of uterus	UBERON:0009853	56.25	gold quality
calcaneal tendon	UBERON:0003701	55.85	gold quality
lower esophagus mucosa	UBERON:0035834	55.53	gold quality
cerebellum	UBERON:0002037	55.43	gold quality
cerebellar cortex	UBERON:0002129	55.41	gold quality
cerebellar hemisphere	UBERON:0002245	55.36	gold quality
right hemisphere of cerebellum	UBERON:0014890	55.30	gold quality
left uterine tube	UBERON:0001303	55.15	gold quality
right coronary artery	UBERON:0001625	54.94	gold quality
ectocervix	UBERON:0012249	53.91	gold quality
prefrontal cortex	UBERON:0000451	53.54	gold quality
right uterine tube	UBERON:0001302	53.47	gold quality
fallopian tube	UBERON:0003889	52.98	gold quality
skeletal muscle tissue	UBERON:0001134	52.76	silver quality
endometrium	UBERON:0001295	52.67	gold quality
gall bladder	UBERON:0002110	52.67	gold quality
prostate gland	UBERON:0002367	52.59	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.