LINC02106

Summary

LINC02106 (long intergenic non-protein coding RNA 2106, HGNC:52961) is a long non-coding RNA gene on chromosome 5q11.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52961
Approved symbol	LINC02106
Name	long intergenic non-protein coding RNA 2106
Location	5q11.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251573
Ensembl biotype	lncRNA
Entrez	100287592
RNAcentral	URS000075BA04 — lncRNA, 626 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 19 — 19 lncRNA

ENST00000506534, ENST00000510349, ENST00000513880, ENST00000717676, ENST00000717677, ENST00000717678, ENST00000747139, ENST00000747140, ENST00000747141, ENST00000747142, ENST00000747143, ENST00000747144, ENST00000747145, ENST00000747146, ENST00000747147, ENST00000747148, ENST00000747149, ENST00000747150, ENST00000747151

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000506534 — 2 exons

Exon	Start	End
ENSE00004088794	50969923	50970255
ENSE00004088824	50969214	50969577

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 93.86.

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
muscle tissue	UBERON:0002385	93.86	gold quality
mucosa of stomach	UBERON:0001199	79.70	gold quality
islet of Langerhans	UBERON:0000006	75.86	gold quality
lymph node	UBERON:0000029	72.91	gold quality
fundus of stomach	UBERON:0001160	69.80	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	69.08	gold quality
endometrium	UBERON:0001295	67.69	gold quality
vagina	UBERON:0000996	66.12	gold quality
ventricular zone	UBERON:0003053	64.41	gold quality
uterine cervix	UBERON:0000002	64.31	gold quality
prostate gland	UBERON:0002367	64.20	gold quality
body of stomach	UBERON:0001161	63.75	gold quality
ectocervix	UBERON:0012249	63.66	gold quality
stomach	UBERON:0000945	63.50	gold quality
pancreas	UBERON:0001264	62.75	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	62.07	gold quality
endocervix	UBERON:0000458	61.50	gold quality
cortical plate	UBERON:0005343	59.46	gold quality
nucleus accumbens	UBERON:0001882	58.79	gold quality
omental fat pad	UBERON:0010414	58.44	gold quality
putamen	UBERON:0001874	58.38	gold quality
duodenum	UBERON:0002114	58.13	gold quality
caudate nucleus	UBERON:0001873	57.68	gold quality
multicellular organism	UBERON:0000468	56.54	gold quality
monocyte	CL:0000576	54.33	gold quality
myometrium	UBERON:0001296	52.92	gold quality
muscle of leg	UBERON:0001383	52.88	gold quality
left ovary	UBERON:0002119	52.51	gold quality
prefrontal cortex	UBERON:0000451	52.12	gold quality
gastrocnemius	UBERON:0001388	52.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.87

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.