LINC02111

Summary

LINC02111 (long intergenic non-protein coding RNA 2111, HGNC:52966) is a long non-coding RNA gene on chromosome 5p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52966
Approved symbol	LINC02111
Name	long intergenic non-protein coding RNA 2111
Location	5p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250822
Ensembl biotype	lncRNA
Entrez	401177
RNAcentral	URS000075A96F — lncRNA, 2322 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000505158, ENST00000717181, ENST00000717182, ENST00000790512, ENST00000790513, ENST00000790514, ENST00000790515, ENST00000790516

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505158 — 3 exons

Exon	Start	End
ENSE00002019940	17384843	17385440
ENSE00004031835	17378906	17380510
ENSE00004031837	17387202	17387310

Expression profiles

Bgee: expression breadth tissue_specific, 6 present calls, max score 78.38.

Top tissues by expression

6 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.38	silver quality
blood	UBERON:0000178	54.27	silver quality
placenta	UBERON:0001987	43.92	silver quality
testis	UBERON:0000473	33.23	silver quality
left testis	UBERON:0004533	32.49	silver quality
right testis	UBERON:0004534	27.70	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.