LINC02122

Summary

LINC02122 (long intergenic non-protein coding RNA 2122, HGNC:52979) is a long non-coding RNA gene on chromosome 5q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52979
Approved symbol	LINC02122
Name	long intergenic non-protein coding RNA 2122
Location	5q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248474
Ensembl biotype	lncRNA
Entrez	105379036
RNAcentral	URS00026A1DEC — lncRNA, 2260 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000511395, ENST00000804119, ENST00000804120, ENST00000804121, ENST00000804122

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000511395 — 3 exons

Exon	Start	End
ENSE00004195213	74102740	74103216
ENSE00004195215	74034247	74036012
ENSE00004195217	74084047	74084167

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 71.65.

Top tissues by expression

60 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
olfactory segment of nasal mucosa	UBERON:0005386	71.65	gold quality
minor salivary gland	UBERON:0001830	66.95	gold quality
saliva-secreting gland	UBERON:0001044	66.77	gold quality
lymph node	UBERON:0000029	60.11	gold quality
gastrocnemius	UBERON:0001388	56.47	gold quality
kidney	UBERON:0002113	55.55	silver quality
spleen	UBERON:0002106	54.49	gold quality
blood	UBERON:0000178	54.02	gold quality
duodenum	UBERON:0002114	53.82	gold quality
placenta	UBERON:0001987	53.74	gold quality
prefrontal cortex	UBERON:0000451	53.35	gold quality
superior frontal gyrus	UBERON:0002661	50.55	gold quality
monocyte	CL:0000576	49.61	silver quality
lower esophagus mucosa	UBERON:0035834	48.60	gold quality
right lung	UBERON:0002167	46.60	gold quality
skin of leg	UBERON:0001511	46.12	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	45.66	gold quality
frontal cortex	UBERON:0001870	45.20	gold quality
heart left ventricle	UBERON:0002084	45.12	silver quality
right atrium auricular region	UBERON:0006631	44.68	silver quality
prostate gland	UBERON:0002367	44.46	gold quality
Brodmann (1909) area 9	UBERON:0013540	44.44	gold quality
stomach	UBERON:0000945	44.41	gold quality
adult mammalian kidney	UBERON:0000082	44.13	silver quality
lung	UBERON:0002048	43.98	silver quality
Ammon’s horn	UBERON:0001954	43.80	gold quality
adrenal tissue	UBERON:0018303	43.73	silver quality
rectum	UBERON:0001052	43.35	gold quality
cerebellar cortex	UBERON:0002129	43.34	silver quality
brain	UBERON:0000955	43.29	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.