LINC02123

Summary

LINC02123 (long intergenic non-protein coding RNA 2123, HGNC:52980) is a long non-coding RNA gene on chromosome 5p15.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52980
Approved symbol	LINC02123
Name	long intergenic non-protein coding RNA 2123
Location	5p15.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250668
Ensembl biotype	lncRNA
Entrez	101929261
RNAcentral	URS00003772C0 — lncRNA, 885 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000514869, ENST00000666886, ENST00000839043, ENST00000839044, ENST00000839045

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514869 — 2 exons

Exon	Start	End
ENSE00004260885	7346986	7347768
ENSE00004260889	7347876	7347996

Expression profiles

Bgee: expression breadth broad, 39 present calls, max score 61.50.

Top tissues by expression

179 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	61.50	gold quality
ganglionic eminence	UBERON:0004023	59.54	gold quality
prefrontal cortex	UBERON:0000451	56.82	gold quality
putamen	UBERON:0001874	54.90	gold quality
anterior cingulate cortex	UBERON:0009835	54.83	gold quality
caudate nucleus	UBERON:0001873	54.36	gold quality
amygdala	UBERON:0001876	54.05	gold quality
nucleus accumbens	UBERON:0001882	53.60	gold quality
right frontal lobe	UBERON:0002810	52.89	gold quality
Brodmann (1909) area 9	UBERON:0013540	52.41	gold quality
neocortex	UBERON:0001950	52.39	gold quality
buccal mucosa cell	CL:0002336	52.00	gold quality
frontal cortex	UBERON:0001870	51.94	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	51.45	gold quality
forebrain	UBERON:0001890	50.62	gold quality
hypothalamus	UBERON:0001898	50.50	gold quality
cerebral cortex	UBERON:0000956	50.23	gold quality
brain	UBERON:0000955	50.07	gold quality
gastrocnemius	UBERON:0001388	48.64	silver quality
substantia nigra	UBERON:0002038	48.04	gold quality
primary visual cortex	UBERON:0002436	47.91	gold quality
temporal lobe	UBERON:0001871	47.88	gold quality
Ammon’s horn	UBERON:0001954	47.73	gold quality
right hemisphere of cerebellum	UBERON:0014890	47.64	gold quality
midbrain	UBERON:0001891	47.17	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	46.46	gold quality
occipital lobe	UBERON:0002021	46.36	gold quality
upper lobe of lung	UBERON:0008948	46.07	silver quality
cerebellar cortex	UBERON:0002129	46.02	gold quality
cerebellar hemisphere	UBERON:0002245	45.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.98

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.