LINC02124

Summary

LINC02124 (long intergenic non-protein coding RNA 2124, HGNC:52981) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52981
Approved symbol	LINC02124
Name	long intergenic non-protein coding RNA 2124
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259947
Ensembl biotype	lncRNA
Entrez	105371048
RNAcentral	URS00001AE952 — lncRNA, 484 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000570087, ENST00000730750, ENST00000730751, ENST00000730752

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000570087 — 2 exons

Exon	Start	End
ENSE00002584479	1889114	1889295
ENSE00002614288	1890133	1890434

Expression profiles

Bgee: expression breadth broad, 68 present calls, max score 83.24.

Top tissues by expression

68 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.24	gold quality
cortical plate	UBERON:0005343	67.65	gold quality
primary visual cortex	UBERON:0002436	57.13	gold quality
monocyte	CL:0000576	55.23	gold quality
prefrontal cortex	UBERON:0000451	53.86	gold quality
hindlimb stylopod muscle	UBERON:0004252	53.61	gold quality
lower esophagus mucosa	UBERON:0035834	53.55	gold quality
adenohypophysis	UBERON:0002196	52.71	gold quality
islet of Langerhans	UBERON:0000006	52.57	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	52.18	gold quality
blood	UBERON:0000178	51.03	silver quality
liver	UBERON:0002107	50.89	silver quality
body of pancreas	UBERON:0001150	50.66	silver quality
placenta	UBERON:0001987	50.13	gold quality
right lobe of liver	UBERON:0001114	49.76	silver quality
skin of leg	UBERON:0001511	49.21	gold quality
zone of skin	UBERON:0000014	48.88	gold quality
heart left ventricle	UBERON:0002084	48.24	gold quality
skin of abdomen	UBERON:0001416	48.13	gold quality
muscle of leg	UBERON:0001383	47.19	gold quality
right testis	UBERON:0004534	46.32	gold quality
thyroid gland	UBERON:0002046	46.08	silver quality
multicellular organism	UBERON:0000468	45.66	gold quality
urinary bladder	UBERON:0001255	45.59	gold quality
gastrocnemius	UBERON:0001388	45.33	gold quality
esophagus mucosa	UBERON:0002469	44.71	gold quality
testis	UBERON:0000473	44.69	gold quality
left testis	UBERON:0004533	44.59	gold quality
left adrenal gland cortex	UBERON:0035825	44.47	silver quality
tibial artery	UBERON:0007610	44.41	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.