LINC02126

Summary

LINC02126 (long intergenic non-protein coding RNA 2126, HGNC:52983) is a long non-coding RNA gene on chromosome 16q21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52983
Approved symbol	LINC02126
Name	long intergenic non-protein coding RNA 2126
Location	16q21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259847
Ensembl biotype	lncRNA
Entrez	101927650
RNAcentral	URS000075C85B — lncRNA, 765 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000562742, ENST00000563754, ENST00000765102, ENST00000765103, ENST00000765104, ENST00000765105, ENST00000765106, ENST00000765107, ENST00000765108, ENST00000765109

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562742 — 4 exons

Exon	Start	End
ENSE00002588860	65175166	65175319
ENSE00002621775	65176068	65176200
ENSE00004122716	65176455	65176786
ENSE00004122720	65172678	65173380

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 84.92.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0166 / max 6.9979, expressed in 1 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
157680	0.0166	1

Top tissues by expression

197 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.92	gold quality
left ovary	UBERON:0002119	75.79	gold quality
right ovary	UBERON:0002118	72.18	gold quality
ovary	UBERON:0000992	69.63	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.38	gold quality
stromal cell of endometrium	CL:0002255	60.30	gold quality
left uterine tube	UBERON:0001303	57.59	gold quality
adenohypophysis	UBERON:0002196	56.24	gold quality
decidua	UBERON:0002450	55.42	silver quality
upper lobe of left lung	UBERON:0008952	54.08	gold quality
gall bladder	UBERON:0002110	53.99	gold quality
pituitary gland	UBERON:0000007	53.32	gold quality
ectocervix	UBERON:0012249	53.12	gold quality
calcaneal tendon	UBERON:0003701	52.71	gold quality
upper lobe of lung	UBERON:0008948	52.50	gold quality
female reproductive system	UBERON:0000474	52.18	gold quality
islet of Langerhans	UBERON:0000006	51.70	gold quality
prefrontal cortex	UBERON:0000451	50.40	gold quality
pancreas	UBERON:0001264	50.24	gold quality
lymph node	UBERON:0000029	49.78	gold quality
lung	UBERON:0002048	49.71	gold quality
monocyte	CL:0000576	49.33	silver quality
buccal mucosa cell	CL:0002336	48.29	gold quality
vermiform appendix	UBERON:0001154	47.54	gold quality
muscle of leg	UBERON:0001383	47.47	silver quality
endometrium	UBERON:0001295	47.40	gold quality
small intestine Peyer’s patch	UBERON:0003454	47.26	gold quality
tendon	UBERON:0000043	47.19	silver quality
upper leg skin	UBERON:0004262	46.75	silver quality
adrenal tissue	UBERON:0018303	46.64	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.