LINC02129

Summary

LINC02129 (long intergenic non-protein coding RNA 2129, HGNC:52988) is a long non-coding RNA gene on chromosome 16p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52988
Approved symbol	LINC02129
Name	long intergenic non-protein coding RNA 2129
Location	16p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261045
Ensembl biotype	lncRNA
Entrez	105371156
RNAcentral	URS0002123186 — lncRNA, 532 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000564381, ENST00000749095

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564381 — 4 exons

Exon	Start	End
ENSE00002588853	27161398	27161672
ENSE00002592504	27158451	27158692
ENSE00002606036	27176563	27176587
ENSE00002612841	27171830	27171979

Expression profiles

Bgee: expression breadth broad, 58 present calls, max score 81.17.

Top tissues by expression

58 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.17	gold quality
ventricular zone	UBERON:0003053	63.84	gold quality
lymph node	UBERON:0000029	58.13	gold quality
myometrium	UBERON:0001296	57.17	gold quality
islet of Langerhans	UBERON:0000006	55.10	gold quality
blood	UBERON:0000178	52.37	silver quality
liver	UBERON:0002107	51.60	silver quality
vermiform appendix	UBERON:0001154	51.00	gold quality
prefrontal cortex	UBERON:0000451	50.40	gold quality
right lobe of liver	UBERON:0001114	49.44	silver quality
thyroid gland	UBERON:0002046	49.25	silver quality
body of pancreas	UBERON:0001150	47.06	gold quality
Brodmann (1909) area 9	UBERON:0013540	45.63	silver quality
muscle of leg	UBERON:0001383	45.54	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	44.88	gold quality
lung	UBERON:0002048	43.53	gold quality
fundus of stomach	UBERON:0001160	43.51	silver quality
heart	UBERON:0000948	43.20	gold quality
gastrocnemius	UBERON:0001388	43.18	silver quality
prostate gland	UBERON:0002367	43.12	gold quality
heart left ventricle	UBERON:0002084	43.05	silver quality
tibial artery	UBERON:0007610	43.05	silver quality
transverse colon	UBERON:0001157	42.92	silver quality
lower esophagus muscularis layer	UBERON:0035833	42.86	silver quality
cerebellar hemisphere	UBERON:0002245	42.59	silver quality
esophagus	UBERON:0001043	42.57	gold quality
anterior cingulate cortex	UBERON:0009835	42.57	gold quality
upper lobe of left lung	UBERON:0008952	42.52	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	42.23	gold quality
right hemisphere of cerebellum	UBERON:0014890	42.11	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.