LINC02130

Summary

LINC02130 (long intergenic non-protein coding RNA 2130, HGNC:52989) is a long non-coding RNA gene on chromosome 16p13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52989
Approved symbol	LINC02130
Name	long intergenic non-protein coding RNA 2130
Location	16p13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260009
Ensembl biotype	lncRNA
Entrez	105447648
RNAcentral	URS00002AC633 — lncRNA, 518 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000566054, ENST00000794062, ENST00000794063, ENST00000794064, ENST00000794065

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000566054 — 2 exons

Exon	Start	End
ENSE00004177547	14363107	14363295
ENSE00004177548	14369936	14370335

Expression profiles

Bgee: expression breadth broad, 63 present calls, max score 97.74.

Top tissues by expression

63 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stomach	UBERON:0000945	97.74	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.94	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.44	gold quality
placenta	UBERON:0001987	65.17	gold quality
skeletal muscle tissue	UBERON:0001134	61.76	gold quality
calcaneal tendon	UBERON:0003701	56.63	gold quality
prefrontal cortex	UBERON:0000451	54.18	gold quality
myometrium	UBERON:0001296	53.54	gold quality
blood	UBERON:0000178	52.21	silver quality
muscle of leg	UBERON:0001383	51.75	gold quality
fallopian tube	UBERON:0003889	51.27	gold quality
gastrocnemius	UBERON:0001388	50.17	gold quality
islet of Langerhans	UBERON:0000006	49.96	gold quality
endometrium	UBERON:0001295	49.22	gold quality
ovary	UBERON:0000992	47.03	gold quality
subcutaneous adipose tissue	UBERON:0002190	46.51	gold quality
vagina	UBERON:0000996	46.14	gold quality
body of pancreas	UBERON:0001150	45.94	gold quality
left coronary artery	UBERON:0001626	45.82	gold quality
adipose tissue	UBERON:0001013	45.54	gold quality
tibial artery	UBERON:0007610	45.11	silver quality
right lobe of liver	UBERON:0001114	44.97	silver quality
substantia nigra	UBERON:0002038	44.41	gold quality
left adrenal gland	UBERON:0001234	44.18	gold quality
right atrium auricular region	UBERON:0006631	44.08	gold quality
thoracic mammary gland	UBERON:0005200	43.84	gold quality
omental fat pad	UBERON:0010414	43.40	gold quality
nucleus accumbens	UBERON:0001882	43.05	gold quality
ascending aorta	UBERON:0001496	42.89	gold quality
multicellular organism	UBERON:0000468	42.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.