LINC02133

Summary

LINC02133 (long intergenic non-protein coding RNA 2133, HGNC:52993) is a long non-coding RNA gene on chromosome 16q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52993
Approved symbol	LINC02133
Name	long intergenic non-protein coding RNA 2133
Location	16q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261231
Ensembl biotype	lncRNA
Entrez	101927132
RNAcentral	URS000075E192 — lncRNA, 2624 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000565451, ENST00000569726

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000565451 — 3 exons

Exon	Start	End
ENSE00002591601	47814630	47814743
ENSE00002595005	47724568	47724846
ENSE00002673189	47863446	47863599

Expression profiles

Bgee: expression breadth broad, 89 present calls, max score 77.55.

Top tissues by expression

89 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.55	gold quality
bone marrow cell	CL:0002092	70.24	silver quality
muscle tissue	UBERON:0002385	66.71	gold quality
ganglionic eminence	UBERON:0004023	62.52	gold quality
adrenal tissue	UBERON:0018303	60.65	gold quality
bone marrow	UBERON:0002371	60.32	silver quality
liver	UBERON:0002107	58.97	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.86	gold quality
monocyte	CL:0000576	55.94	gold quality
myometrium	UBERON:0001296	54.28	silver quality
gall bladder	UBERON:0002110	53.27	gold quality
lymph node	UBERON:0000029	53.02	gold quality
prefrontal cortex	UBERON:0000451	52.91	gold quality
primary visual cortex	UBERON:0002436	50.82	gold quality
blood	UBERON:0000178	50.39	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.86	gold quality
frontal cortex	UBERON:0001870	48.31	gold quality
superior frontal gyrus	UBERON:0002661	48.29	gold quality
right adrenal gland cortex	UBERON:0035827	48.16	gold quality
gastrocnemius	UBERON:0001388	47.92	gold quality
adrenal gland	UBERON:0002369	47.01	gold quality
left adrenal gland cortex	UBERON:0035825	46.75	gold quality
thoracic mammary gland	UBERON:0005200	46.37	gold quality
hypothalamus	UBERON:0001898	46.08	gold quality
kidney	UBERON:0002113	46.03	gold quality
left adrenal gland	UBERON:0001234	45.92	gold quality
right adrenal gland	UBERON:0001233	45.91	gold quality
islet of Langerhans	UBERON:0000006	45.77	silver quality
body of pancreas	UBERON:0001150	45.29	silver quality
heart left ventricle	UBERON:0002084	45.27	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.92

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.