LINC02135

Summary

LINC02135 (long intergenic non-protein coding RNA 2135, HGNC:27094) is a long non-coding RNA gene on chromosome 16q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27094
Approved symbol	LINC02135
Name	long intergenic non-protein coding RNA 2135
Location	16q24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000268532
Ensembl biotype	lncRNA
Entrez	146513
RNAcentral	URS000075D697 — lncRNA, 2102 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000599486

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000599486 — 3 exons

Exon	Start	End
ENSE00002989456	86286427	86286549
ENSE00003056941	86290665	86290744
ENSE00003178967	86291528	86293389

Expression profiles

Bgee: expression breadth broad, 23 present calls, max score 55.20.

Top tissues by expression

178 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endothelial cell	CL:0000115	55.20	gold quality
sperm	CL:0000019	55.11	gold quality
buccal mucosa cell	CL:0002336	52.79	gold quality
tendon of biceps brachii	UBERON:0008188	52.01	gold quality
smooth muscle tissue	UBERON:0001135	48.32	gold quality
amniotic fluid	UBERON:0000173	47.19	gold quality
muscle layer of sigmoid colon	UBERON:0035805	45.33	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	44.93	gold quality
transverse colon	UBERON:0001157	44.31	gold quality
mucosa of transverse colon	UBERON:0004991	44.15	silver quality
colon	UBERON:0001155	44.06	gold quality
middle temporal gyrus	UBERON:0002771	43.99	gold quality
tendon	UBERON:0000043	43.91	gold quality
large intestine	UBERON:0000059	43.85	gold quality
intestine	UBERON:0000160	43.80	gold quality
small intestine Peyer’s patch	UBERON:0003454	43.70	gold quality
small intestine	UBERON:0002108	43.56	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
deltoid	UBERON:0001476	43.36	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
gall bladder	UBERON:0002110	42.53	silver quality
body of stomach	UBERON:0001161	42.44	silver quality
stomach	UBERON:0000945	42.19	silver quality
urinary bladder	UBERON:0001255	42.15	silver quality
rectum	UBERON:0001052	42.13	gold quality
blood	UBERON:0000178	42.08	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
skeletal muscle tissue	UBERON:0001134	41.49	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.