LINC02136

Summary

LINC02136 (long intergenic non-protein coding RNA 2136, HGNC:52995) is a long non-coding RNA gene on chromosome 16q22.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52995
Approved symbol	LINC02136
Name	long intergenic non-protein coding RNA 2136
Location	16q22.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261348
Ensembl biotype	lncRNA
Entrez	105371333
RNAcentral	URS0000BC43FC — lncRNA, 529 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000567469, ENST00000819690

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000567469 — 6 exons

Exon	Start	End
ENSE00002593246	71410346	71410534
ENSE00002596426	71426161	71426464
ENSE00002620209	71414865	71414995
ENSE00003852558	71374502	71374582
ENSE00003872014	71368839	71368917
ENSE00003884523	71366933	71367359

Expression profiles

Bgee: expression breadth broad, 40 present calls, max score 85.70.

Top tissues by expression

40 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.70	silver quality
prefrontal cortex	UBERON:0000451	49.67	silver quality
thyroid gland	UBERON:0002046	49.54	silver quality
blood	UBERON:0000178	49.36	silver quality
myometrium	UBERON:0001296	48.53	gold quality
superior frontal gyrus	UBERON:0002661	46.78	silver quality
muscle layer of sigmoid colon	UBERON:0035805	44.33	silver quality
stomach	UBERON:0000945	44.27	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	44.26	silver quality
cerebellar cortex	UBERON:0002129	44.24	silver quality
Brodmann (1909) area 9	UBERON:0013540	44.16	silver quality
hypothalamus	UBERON:0001898	44.06	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	43.23	silver quality
left ovary	UBERON:0002119	43.10	gold quality
small intestine Peyer’s patch	UBERON:0003454	43.10	silver quality
putamen	UBERON:0001874	42.65	silver quality
substantia nigra	UBERON:0002038	42.28	gold quality
esophagus mucosa	UBERON:0002469	42.00	silver quality
right frontal lobe	UBERON:0002810	41.94	silver quality
right hemisphere of cerebellum	UBERON:0014890	41.89	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	41.72	gold quality
omental fat pad	UBERON:0010414	41.52	silver quality
smooth muscle tissue	UBERON:0001135	41.35	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	40.60	silver quality
amygdala	UBERON:0001876	40.09	silver quality
right ovary	UBERON:0002118	39.70	silver quality
nucleus accumbens	UBERON:0001882	39.51	silver quality
fallopian tube	UBERON:0003889	39.05	silver quality
anterior cingulate cortex	UBERON:0009835	38.90	gold quality
multicellular organism	UBERON:0000468	38.87	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.18

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.