LINC02137

Summary

LINC02137 (long intergenic non-protein coding RNA 2137, HGNC:52997) is a long non-coding RNA gene on chromosome 16q21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52997
Approved symbol	LINC02137
Name	long intergenic non-protein coding RNA 2137
Location	16q21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260186
Ensembl biotype	lncRNA
Entrez	105371295
RNAcentral	URS00026A2213 — lncRNA, 1048 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000561906, ENST00000562322, ENST00000567448, ENST00000725711, ENST00000725712, ENST00000725713

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561906 — 4 exons

Exon	Start	End
ENSE00002602998	58462154	58462470
ENSE00002609681	58421339	58421421
ENSE00002614003	58435692	58435823
ENSE00002618824	58461471	58461582

Expression profiles

Bgee: expression breadth ubiquitous, 122 present calls, max score 94.25.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0514 / max 12.5491, expressed in 21 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
154446	0.0514	21

Top tissues by expression

122 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
putamen	UBERON:0001874	94.25	gold quality
caudate nucleus	UBERON:0001873	93.22	gold quality
right atrium auricular region	UBERON:0006631	92.70	gold quality
nucleus accumbens	UBERON:0001882	88.21	gold quality
heart	UBERON:0000948	82.22	gold quality
heart left ventricle	UBERON:0002084	81.43	gold quality
apex of heart	UBERON:0002098	80.63	gold quality
skin of abdomen	UBERON:0001416	75.40	gold quality
zone of skin	UBERON:0000014	74.58	gold quality
cerebellar hemisphere	UBERON:0002245	74.48	gold quality
skin of leg	UBERON:0001511	74.31	gold quality
cerebellar cortex	UBERON:0002129	74.22	gold quality
cerebellum	UBERON:0002037	74.13	gold quality
right hemisphere of cerebellum	UBERON:0014890	73.58	gold quality
ectocervix	UBERON:0012249	71.81	gold quality
tonsil	UBERON:0002372	70.89	gold quality
endometrium	UBERON:0001295	66.08	gold quality
right uterine tube	UBERON:0001302	66.02	gold quality
ventricular zone	UBERON:0003053	65.52	gold quality
right adrenal gland cortex	UBERON:0035827	65.52	gold quality
right adrenal gland	UBERON:0001233	65.29	gold quality
lymph node	UBERON:0000029	64.92	gold quality
brain	UBERON:0000955	64.63	gold quality
vagina	UBERON:0000996	64.43	gold quality
left adrenal gland cortex	UBERON:0035825	62.99	gold quality
adrenal gland	UBERON:0002369	62.40	gold quality
left adrenal gland	UBERON:0001234	62.25	gold quality
ganglionic eminence	UBERON:0004023	62.07	gold quality
skeletal muscle tissue	UBERON:0001134	61.84	gold quality
sural nerve	UBERON:0015488	60.54	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.08

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.