LINC02145

Summary

LINC02145 (long intergenic non-protein coding RNA 2145, HGNC:53005) is a long non-coding RNA gene on chromosome 5p15.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53005
Approved symbol	LINC02145
Name	long intergenic non-protein coding RNA 2145
Location	5p15.31
Locus type	RNA, long non-coding
Status	Approved
Aliases	CTC, FLJ33360
Ensembl gene	ENSG00000250490
Ensembl biotype	lncRNA
Entrez	401172
RNAcentral	URS000032D159 — lncRNA, 2419 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000502644, ENST00000507444

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502644 — 2 exons

Exon	Start	End
ENSE00002023234	6339412	6339884
ENSE00002063902	6337239	6337323

Expression profiles

Bgee: expression breadth ubiquitous, 155 present calls, max score 77.33.

Top tissues by expression

233 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.33	gold quality
right uterine tube	UBERON:0001302	77.05	gold quality
right hemisphere of cerebellum	UBERON:0014890	70.20	gold quality
cerebellar hemisphere	UBERON:0002245	69.96	gold quality
cerebellar cortex	UBERON:0002129	69.84	gold quality
cerebellum	UBERON:0002037	67.91	gold quality
bone marrow cell	CL:0002092	67.81	silver quality
popliteal artery	UBERON:0002250	67.30	gold quality
tibial artery	UBERON:0007610	67.27	gold quality
right coronary artery	UBERON:0001625	66.63	gold quality
cortical plate	UBERON:0005343	65.54	gold quality
endocervix	UBERON:0000458	65.51	gold quality
left ovary	UBERON:0002119	65.16	gold quality
sural nerve	UBERON:0015488	65.09	silver quality
aorta	UBERON:0000947	65.04	gold quality
right ovary	UBERON:0002118	64.89	gold quality
descending thoracic aorta	UBERON:0002345	64.56	gold quality
body of pancreas	UBERON:0001150	64.30	gold quality
left coronary artery	UBERON:0001626	63.53	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	63.50	gold quality
lower esophagus muscularis layer	UBERON:0035833	63.22	gold quality
lower esophagus	UBERON:0013473	63.14	gold quality
spleen	UBERON:0002106	63.00	gold quality
muscle layer of sigmoid colon	UBERON:0035805	62.91	gold quality
tibial nerve	UBERON:0001323	62.73	gold quality
coronary artery	UBERON:0001621	62.51	gold quality
ascending aorta	UBERON:0001496	62.50	gold quality
ectocervix	UBERON:0012249	62.49	gold quality
right lobe of thyroid gland	UBERON:0001119	62.48	gold quality
mucosa of transverse colon	UBERON:0004991	62.47	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.10

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.