LINC02149

Summary

LINC02149 (long intergenic non-protein coding RNA 2149, HGNC:53010) is a long non-coding RNA gene on chromosome 5p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53010
Approved symbol	LINC02149
Name	long intergenic non-protein coding RNA 2149
Location	5p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249332
Ensembl biotype	lncRNA
Entrez	101929454
RNAcentral	URS000075AFDD — lncRNA, 1092 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000502680, ENST00000511443, ENST00000651224, ENST00000788346, ENST00000788347, ENST00000788348, ENST00000796988, ENST00000796989

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502680 — 3 exons

Exon	Start	End
ENSE00002051211	15116139	15116264
ENSE00004183202	15116904	15117113
ENSE00004183203	15112116	15112968

Expression profiles

Bgee: expression breadth broad, 58 present calls, max score 89.30.

Top tissues by expression

175 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.30	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.16	gold quality
sural nerve	UBERON:0015488	78.73	silver quality
tibialis anterior	UBERON:0001385	60.18	silver quality
gall bladder	UBERON:0002110	58.65	gold quality
ileal mucosa	UBERON:0000331	55.75	silver quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
deltoid	UBERON:0001476	53.34	gold quality
epithelial cell of pancreas	CL:0000083	53.03	gold quality
monocyte	CL:0000576	51.65	gold quality
adult mammalian kidney	UBERON:0000082	51.13	gold quality
gastrocnemius	UBERON:0001388	51.08	silver quality
right ovary	UBERON:0002118	50.91	gold quality
myocardium	UBERON:0002349	50.25	gold quality
kidney	UBERON:0002113	49.82	gold quality
cortex of kidney	UBERON:0001225	49.66	gold quality
nasal cavity epithelium	UBERON:0005384	47.56	gold quality
quadriceps femoris	UBERON:0001377	47.40	gold quality
pancreatic ductal cell	CL:0002079	46.68	silver quality
prefrontal cortex	UBERON:0000451	46.54	gold quality
body of pancreas	UBERON:0001150	46.21	gold quality
tibial artery	UBERON:0007610	45.77	gold quality
skeletal muscle tissue	UBERON:0001134	45.62	gold quality
vastus lateralis	UBERON:0001379	45.40	gold quality
vermiform appendix	UBERON:0001154	45.35	silver quality
left ovary	UBERON:0002119	45.02	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.