LINC02151

Summary

LINC02151 (long intergenic non-protein coding RNA 2151, HGNC:53013) is a long non-coding RNA gene on chromosome 11q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53013
Approved symbol	LINC02151
Name	long intergenic non-protein coding RNA 2151
Location	11q23.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.332, TCONS_00019174
Ensembl gene	ENSG00000236437
Ensembl biotype	lncRNA
Entrez	109729162
RNAcentral	URS00025E3586 — lncRNA, 974 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000452629, ENST00000815587, ENST00000815588, ENST00000815589, ENST00000815590

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452629 — 2 exons

Exon	Start	End
ENSE00004217687	116496564	116497730
ENSE00004217694	116500542	116500654

Expression profiles

Bgee: expression breadth broad, 31 present calls, max score 98.55.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0263 / max 21.3784, expressed in 5 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
122416	0.0263	5

Top tissues by expression

31 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	98.55	gold quality
ventricular zone	UBERON:0003053	61.55	gold quality
cortical plate	UBERON:0005343	56.64	gold quality
liver	UBERON:0002107	55.16	silver quality
blood	UBERON:0000178	55.11	silver quality
prefrontal cortex	UBERON:0000451	52.10	silver quality
adrenal gland	UBERON:0002369	51.35	gold quality
gall bladder	UBERON:0002110	51.03	gold quality
heart	UBERON:0000948	50.32	silver quality
right lobe of liver	UBERON:0001114	48.90	gold quality
frontal cortex	UBERON:0001870	45.63	silver quality
cerebral cortex	UBERON:0000956	43.16	gold quality
Ammon’s horn	UBERON:0001954	42.27	gold quality
amygdala	UBERON:0001876	42.02	silver quality
Brodmann (1909) area 9	UBERON:0013540	41.92	silver quality
muscle layer of sigmoid colon	UBERON:0035805	41.89	silver quality
multicellular organism	UBERON:0000468	41.23	gold quality
ovary	UBERON:0000992	41.21	silver quality
anterior cingulate cortex	UBERON:0009835	41.13	silver quality
caudate nucleus	UBERON:0001873	40.32	silver quality
nucleus accumbens	UBERON:0001882	39.96	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	39.94	silver quality
skin of leg	UBERON:0001511	39.74	silver quality
hypothalamus	UBERON:0001898	39.32	silver quality
left ovary	UBERON:0002119	38.66	silver quality
putamen	UBERON:0001874	38.56	silver quality
right frontal lobe	UBERON:0002810	37.80	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	36.58	silver quality
substantia nigra	UBERON:0002038	35.82	silver quality
left testis	UBERON:0004533	27.13	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.