LINC02156

Summary

LINC02156 (long intergenic non-protein coding RNA 2156, HGNC:53017) is a long non-coding RNA gene on chromosome 12q13.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53017
Approved symbol	LINC02156
Name	long intergenic non-protein coding RNA 2156
Location	12q13.11
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP1-90J4.1
Ensembl gene	ENSG00000257906
Ensembl biotype	lncRNA
Entrez	111082992
RNAcentral	URS00002E7849 — lncRNA, 483 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000552320, ENST00000648410, ENST00000650246, ENST00000653282, ENST00000654304, ENST00000654817, ENST00000656812, ENST00000659201, ENST00000659511, ENST00000659658, ENST00000660395, ENST00000660540, ENST00000662412, ENST00000718405, ENST00000718406, ENST00000718407

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000552320 — 2 exons

Exon	Start	End
ENSE00002358902	47419922	47420179
ENSE00003833403	47414651	47415232

Expression profiles

Bgee: expression breadth ubiquitous, 113 present calls, max score 82.42.

Top tissues by expression

113 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.42	gold quality
colonic epithelium	UBERON:0000397	79.56	gold quality
left testis	UBERON:0004533	78.13	gold quality
testis	UBERON:0000473	77.87	gold quality
right testis	UBERON:0004534	77.46	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.61	gold quality
sural nerve	UBERON:0015488	69.49	gold quality
bone marrow cell	CL:0002092	66.55	silver quality
bone marrow	UBERON:0002371	65.38	gold quality
liver	UBERON:0002107	64.32	gold quality
right lobe of liver	UBERON:0001114	63.71	gold quality
tonsil	UBERON:0002372	62.63	gold quality
duodenum	UBERON:0002114	60.02	gold quality
lymph node	UBERON:0000029	58.84	gold quality
prefrontal cortex	UBERON:0000451	58.56	gold quality
urinary bladder	UBERON:0001255	57.17	gold quality
adrenal tissue	UBERON:0018303	56.10	gold quality
blood	UBERON:0000178	55.95	gold quality
kidney	UBERON:0002113	55.91	gold quality
monocyte	CL:0000576	55.69	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.47	gold quality
leukocyte	CL:0000738	55.43	gold quality
placenta	UBERON:0001987	54.78	gold quality
mucosa of transverse colon	UBERON:0004991	53.75	gold quality
caudate nucleus	UBERON:0001873	53.37	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	52.62	gold quality
substantia nigra	UBERON:0002038	52.28	gold quality
hypothalamus	UBERON:0001898	51.86	gold quality
muscle tissue	UBERON:0002385	51.82	gold quality
gall bladder	UBERON:0002110	51.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.90

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.