LINC02162

Summary

LINC02162 (long intergenic non-protein coding RNA 2162, HGNC:53023) is a long non-coding RNA gene on chromosome 5p15.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53023
Approved symbol	LINC02162
Name	long intergenic non-protein coding RNA 2162
Location	5p15.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249830
Ensembl biotype	lncRNA
Entrez	105374624
RNAcentral	URS0000367797 — lncRNA, 574 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000512521, ENST00000839781, ENST00000839782, ENST00000839783, ENST00000839784, ENST00000839785

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000512521 — 3 exons

Exon	Start	End
ENSE00002027230	3453705	3453787
ENSE00004262369	3461317	3462326
ENSE00004262370	3452816	3452962

Expression profiles

Bgee: expression breadth broad, 23 present calls, max score 62.16.

Top tissues by expression

23 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	62.16	gold quality
left testis	UBERON:0004533	55.61	gold quality
testis	UBERON:0000473	55.24	gold quality
right testis	UBERON:0004534	55.12	gold quality
cortex of kidney	UBERON:0001225	54.56	gold quality
liver	UBERON:0002107	53.37	silver quality
multicellular organism	UBERON:0000468	52.62	gold quality
gastrocnemius	UBERON:0001388	47.70	gold quality
blood	UBERON:0000178	45.42	silver quality
left adrenal gland	UBERON:0001234	45.41	gold quality
lower esophagus muscularis layer	UBERON:0035833	44.91	silver quality
right lobe of thyroid gland	UBERON:0001119	44.66	silver quality
thyroid gland	UBERON:0002046	41.37	silver quality
tibial artery	UBERON:0007610	41.23	silver quality
skin of leg	UBERON:0001511	40.84	silver quality
subcutaneous adipose tissue	UBERON:0002190	39.69	silver quality
hypothalamus	UBERON:0001898	39.04	silver quality
transverse colon	UBERON:0001157	37.49	silver quality
stomach	UBERON:0000945	37.17	silver quality
omental fat pad	UBERON:0010414	36.98	silver quality
esophagus mucosa	UBERON:0002469	34.42	silver quality
tibial nerve	UBERON:0001323	33.92	silver quality
right frontal lobe	UBERON:0002810	28.36	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.