LINC02164

Summary

LINC02164 (long intergenic non-protein coding RNA 2164, HGNC:53025) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53025
Approved symbol	LINC02164
Name	long intergenic non-protein coding RNA 2164
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261811
Ensembl biotype	lncRNA
Entrez	105371066
RNAcentral	URS0000EF0EB5 — lncRNA, 672 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000566684

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000566684 — 3 exons

Exon	Start	End
ENSE00002576606	5220505	5220843
ENSE00002602656	5215854	5215984
ENSE00002614649	5215243	5215444

Expression profiles

Bgee: expression breadth broad, 20 present calls, max score 90.45.

Top tissues by expression

20 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.45	gold quality
monocyte	CL:0000576	54.82	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.88	silver quality
thyroid gland	UBERON:0002046	44.65	silver quality
testis	UBERON:0000473	42.54	gold quality
putamen	UBERON:0001874	42.39	silver quality
multicellular organism	UBERON:0000468	42.25	gold quality
left testis	UBERON:0004533	41.95	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	41.71	silver quality
tibial artery	UBERON:0007610	41.67	silver quality
Ammon’s horn	UBERON:0001954	41.59	silver quality
blood	UBERON:0000178	41.56	silver quality
right frontal lobe	UBERON:0002810	41.46	silver quality
right testis	UBERON:0004534	40.65	gold quality
ascending aorta	UBERON:0001496	39.73	silver quality
prostate gland	UBERON:0002367	37.94	silver quality
gastrocnemius	UBERON:0001388	37.90	silver quality
tibial nerve	UBERON:0001323	37.55	silver quality
skin of leg	UBERON:0001511	37.49	silver quality
omental fat pad	UBERON:0010414	35.10	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.98

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.