LINC02167

Summary

LINC02167 (long intergenic non-protein coding RNA 2167, HGNC:53028) is a long non-coding RNA gene on chromosome 16p11.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53028
Approved symbol	LINC02167
Name	long intergenic non-protein coding RNA 2167
Location	16p11.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ26245
Ensembl gene	ENSG00000261122
Ensembl biotype	lncRNA
Entrez	400533
RNAcentral	URS000075C3C3 — lncRNA, 1598 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000562769, ENST00000565625, ENST00000566900

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562769 — 4 exons

Exon	Start	End
ENSE00002579653	35748761	35748837
ENSE00002594766	35755379	35755626
ENSE00002600633	35745699	35745832
ENSE00002601810	35743268	35743402

Expression profiles

Bgee: expression breadth broad, 56 present calls, max score 69.61.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3873 / max 428.5906, expressed in 9 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
153908	0.1893	7
153907	0.1791	8
153909	0.0189	5

Top tissues by expression

56 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prostate gland	UBERON:0002367	69.61	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.11	gold quality
endometrium	UBERON:0001295	58.05	gold quality
liver	UBERON:0002107	57.65	gold quality
cortex of kidney	UBERON:0001225	53.26	gold quality
blood	UBERON:0000178	51.29	gold quality
monocyte	CL:0000576	51.10	silver quality
rectum	UBERON:0001052	50.02	gold quality
prefrontal cortex	UBERON:0000451	49.93	gold quality
bone marrow	UBERON:0002371	49.86	silver quality
right ovary	UBERON:0002118	49.56	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	48.69	gold quality
placenta	UBERON:0001987	47.18	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	46.46	silver quality
tibial nerve	UBERON:0001323	46.30	gold quality
gastrocnemius	UBERON:0001388	46.01	silver quality
islet of Langerhans	UBERON:0000006	45.54	silver quality
tonsil	UBERON:0002372	45.11	gold quality
heart left ventricle	UBERON:0002084	43.95	silver quality
heart	UBERON:0000948	43.80	silver quality
nucleus accumbens	UBERON:0001882	43.66	gold quality
left ovary	UBERON:0002119	43.59	gold quality
right atrium auricular region	UBERON:0006631	43.42	silver quality
right hemisphere of cerebellum	UBERON:0014890	42.76	silver quality
left coronary artery	UBERON:0001626	42.41	silver quality
colon	UBERON:0001155	42.05	gold quality
tibial artery	UBERON:0007610	42.03	silver quality
transverse colon	UBERON:0001157	41.99	silver quality
popliteal artery	UBERON:0002250	41.82	silver quality
zone of skin	UBERON:0000014	41.71	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.