LINC02173

Summary

LINC02173 (long intergenic non-protein coding RNA 2173, HGNC:53035) is a long non-coding RNA gene on chromosome 4q24.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53035
Approved symbol	LINC02173
Name	long intergenic non-protein coding RNA 2173
Location	4q24
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249613
Ensembl biotype	lncRNA
Entrez	105377355
RNAcentral	URS00001966BE — lncRNA, 521 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000504132, ENST00000654498, ENST00000667859

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504132 — 4 exons

Exon	Start	End
ENSE00002032612	106449011	106449087
ENSE00002063516	106434612	106434701
ENSE00002085026	106453226	106453448
ENSE00002085241	106433624	106433754

Expression profiles

Bgee: expression breadth broad, 26 present calls, max score 59.54.

Top tissues by expression

26 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	59.54	silver quality
left testis	UBERON:0004533	58.22	gold quality
monocyte	CL:0000576	58.09	gold quality
testis	UBERON:0000473	57.50	gold quality
transverse colon	UBERON:0001157	57.25	gold quality
blood	UBERON:0000178	56.40	gold quality
right testis	UBERON:0004534	55.98	gold quality
multicellular organism	UBERON:0000468	54.97	gold quality
islet of Langerhans	UBERON:0000006	54.57	gold quality
gastrocnemius	UBERON:0001388	50.04	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.36	silver quality
tibial nerve	UBERON:0001323	46.82	gold quality
body of stomach	UBERON:0001161	45.73	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	42.60	silver quality
muscle layer of sigmoid colon	UBERON:0035805	42.37	gold quality
body of uterus	UBERON:0009853	41.29	silver quality
subcutaneous adipose tissue	UBERON:0002190	41.16	silver quality
esophagus mucosa	UBERON:0002469	41.02	silver quality
Ammon’s horn	UBERON:0001954	40.24	silver quality
skin of leg	UBERON:0001511	39.81	silver quality
upper lobe of left lung	UBERON:0008952	39.70	silver quality
small intestine Peyer’s patch	UBERON:0003454	39.28	silver quality
omental fat pad	UBERON:0010414	39.24	silver quality
body of pancreas	UBERON:0001150	38.85	silver quality
metanephros cortex	UBERON:0010533	35.99	silver quality
right frontal lobe	UBERON:0002810	30.44	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.