LINC02176

Summary

LINC02176 (long intergenic non-protein coding RNA 2176, HGNC:53038) is a long non-coding RNA gene on chromosome 16q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53038
Approved symbol	LINC02176
Name	long intergenic non-protein coding RNA 2176
Location	16q24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260340
Ensembl biotype	lncRNA
Entrez	105371379
RNAcentral	URS0002A532F0 — lncRNA, 1109 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000569104, ENST00000790733, ENST00000790734

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000569104 — 3 exons

Exon	Start	End
ENSE00001531085	84939381	84939603
ENSE00002617152	84937935	84938056
ENSE00002621877	84928353	84928605

Expression profiles

Bgee: expression breadth broad, 82 present calls, max score 79.93.

Top tissues by expression

82 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.93	silver quality
hindlimb stylopod muscle	UBERON:0004252	62.68	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.12	gold quality
muscle tissue	UBERON:0002385	58.22	gold quality
liver	UBERON:0002107	58.06	gold quality
skeletal muscle tissue	UBERON:0001134	57.43	gold quality
gall bladder	UBERON:0002110	56.26	gold quality
spleen	UBERON:0002106	55.38	gold quality
temporal lobe	UBERON:0001871	55.09	gold quality
islet of Langerhans	UBERON:0000006	53.44	gold quality
monocyte	CL:0000576	53.08	gold quality
right adrenal gland	UBERON:0001233	52.81	gold quality
prefrontal cortex	UBERON:0000451	52.19	gold quality
right adrenal gland cortex	UBERON:0035827	51.81	gold quality
right atrium auricular region	UBERON:0006631	51.18	gold quality
endocervix	UBERON:0000458	51.00	gold quality
myometrium	UBERON:0001296	50.81	gold quality
blood	UBERON:0000178	50.69	silver quality
muscle of leg	UBERON:0001383	50.63	gold quality
apex of heart	UBERON:0002098	49.77	gold quality
smooth muscle tissue	UBERON:0001135	49.65	gold quality
urinary bladder	UBERON:0001255	49.45	gold quality
heart	UBERON:0000948	49.22	gold quality
adrenal gland	UBERON:0002369	48.73	gold quality
left adrenal gland	UBERON:0001234	48.45	gold quality
testis	UBERON:0000473	47.78	gold quality
cerebellar hemisphere	UBERON:0002245	47.43	gold quality
left adrenal gland cortex	UBERON:0035825	47.37	gold quality
heart left ventricle	UBERON:0002084	47.31	gold quality
left testis	UBERON:0004533	46.90	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.