LINC02182

Summary

LINC02182 (long intergenic non-protein coding RNA 2182, HGNC:53044) is a long non-coding RNA gene on chromosome 16q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53044
Approved symbol	LINC02182
Name	long intergenic non-protein coding RNA 2182
Location	16q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260420
Ensembl biotype	lncRNA
Entrez	101928880
RNAcentral	URS000075D300 — lncRNA, 516 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 36 — 36 lncRNA

ENST00000563190, ENST00000569362, ENST00000665557, ENST00000690925, ENST00000718464, ENST00000718465, ENST00000718466, ENST00000767800, ENST00000767801, ENST00000767802, ENST00000767803, ENST00000767804, ENST00000767805, ENST00000767806, ENST00000767807, ENST00000767808, ENST00000767809, ENST00000767810, ENST00000767811, ENST00000767812, ENST00000767813, ENST00000767814, ENST00000767815, ENST00000767816, ENST00000767817, ENST00000767818, ENST00000767819, ENST00000767820, ENST00000767821, ENST00000767822, ENST00000767823, ENST00000767824, ENST00000767825, ENST00000767826, ENST00000767827, ENST00000767828

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563190 — 4 exons

Exon	Start	End
ENSE00002598310	88302422	88302511
ENSE00002608862	88234785	88234903
ENSE00004035175	88294719	88294841
ENSE00004035178	88276474	88276575

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 91.21.

Top tissues by expression

111 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.21	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.73	gold quality
right lobe of liver	UBERON:0001114	65.75	gold quality
liver	UBERON:0002107	65.52	gold quality
islet of Langerhans	UBERON:0000006	64.80	gold quality
skeletal muscle tissue	UBERON:0001134	62.51	gold quality
monocyte	CL:0000576	61.00	gold quality
duodenum	UBERON:0002114	60.81	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	59.45	gold quality
granulocyte	CL:0000094	58.96	gold quality
gall bladder	UBERON:0002110	58.55	gold quality
lymph node	UBERON:0000029	58.20	gold quality
prefrontal cortex	UBERON:0000451	57.79	gold quality
hypothalamus	UBERON:0001898	56.81	gold quality
substantia nigra	UBERON:0002038	56.51	gold quality
pancreas	UBERON:0001264	55.31	gold quality
calcaneal tendon	UBERON:0003701	55.30	gold quality
endocervix	UBERON:0000458	54.05	gold quality
blood	UBERON:0000178	54.00	gold quality
bone marrow	UBERON:0002371	53.72	silver quality
amygdala	UBERON:0001876	53.59	gold quality
kidney	UBERON:0002113	53.18	gold quality
right ovary	UBERON:0002118	53.13	gold quality
muscle of leg	UBERON:0001383	52.89	gold quality
adult mammalian kidney	UBERON:0000082	52.70	gold quality
placenta	UBERON:0001987	52.62	gold quality
Ammon’s horn	UBERON:0001954	52.51	gold quality
superior frontal gyrus	UBERON:0002661	52.45	gold quality
frontal cortex	UBERON:0001870	52.32	gold quality
ovary	UBERON:0000992	52.28	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.03

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.