LINC02192

Summary

LINC02192 (long intergenic non-protein coding RNA 2192, HGNC:53054) is a long non-coding RNA gene on chromosome 16q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53054
Approved symbol	LINC02192
Name	long intergenic non-protein coding RNA 2192
Location	16q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261325
Ensembl biotype	lncRNA
Entrez	100507534
RNAcentral	URS000075CD9B — lncRNA, 1341 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000570024, ENST00000752759, ENST00000752760, ENST00000752761, ENST00000752762

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000570024 — 2 exons

Exon	Start	End
ENSE00004099207	47886441	47887258
ENSE00004099214	47849304	47849948

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 83.93.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0845 / max 28.7072, expressed in 40 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
157249	0.0812	39
157248	0.0033	1

Top tissues by expression

174 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.93	gold quality
pons	UBERON:0000988	73.07	gold quality
prefrontal cortex	UBERON:0000451	73.03	gold quality
right frontal lobe	UBERON:0002810	67.79	gold quality
Brodmann (1909) area 9	UBERON:0013540	67.00	gold quality
frontal cortex	UBERON:0001870	66.54	gold quality
right hemisphere of cerebellum	UBERON:0014890	66.08	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	65.36	gold quality
neocortex	UBERON:0001950	64.99	gold quality
hypothalamus	UBERON:0001898	63.23	gold quality
anterior cingulate cortex	UBERON:0009835	62.88	gold quality
cerebral cortex	UBERON:0000956	61.89	gold quality
body of pancreas	UBERON:0001150	60.15	gold quality
Ammon’s horn	UBERON:0001954	59.14	gold quality
ganglionic eminence	UBERON:0004023	58.80	gold quality
putamen	UBERON:0001874	58.59	gold quality
forebrain	UBERON:0001890	58.46	gold quality
cerebellar hemisphere	UBERON:0002245	58.08	gold quality
brain	UBERON:0000955	57.60	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.57	gold quality
caudate nucleus	UBERON:0001873	54.49	gold quality
amygdala	UBERON:0001876	54.08	gold quality
nucleus accumbens	UBERON:0001882	53.16	gold quality
gastrocnemius	UBERON:0001388	51.76	gold quality
superior frontal gyrus	UBERON:0002661	51.07	gold quality
substantia nigra	UBERON:0002038	50.43	gold quality
inferior vagus X ganglion	UBERON:0005363	50.32	silver quality
midbrain	UBERON:0001891	50.19	gold quality
anatomical system	UBERON:0000467	49.27	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	49.23	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.