LINC02201

Summary

LINC02201 (long intergenic non-protein coding RNA 2201, HGNC:53067) is a long non-coding RNA gene on chromosome 5q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53067
Approved symbol	LINC02201
Name	long intergenic non-protein coding RNA 2201
Location	5q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251538
Ensembl biotype	lncRNA
Entrez	101927379
RNAcentral	URS000075DF69 — lncRNA, 1675 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 17 — 17 lncRNA

ENST00000508992, ENST00000511194, ENST00000514657, ENST00000649085, ENST00000656860, ENST00000659891, ENST00000669389, ENST00000719844, ENST00000719845, ENST00000719846, ENST00000719847, ENST00000719848, ENST00000719849, ENST00000719850, ENST00000719851, ENST00000719852, ENST00000719853

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508992 — 2 exons

Exon	Start	End
ENSE00002044657	122729409	122729679
ENSE00002083308	122730489	122730685

Expression profiles

Bgee: expression breadth broad, 72 present calls, max score 83.87.

Top tissues by expression

174 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.87	gold quality
buccal mucosa cell	CL:0002336	75.38	gold quality
sural nerve	UBERON:0015488	70.79	gold quality
oviduct epithelium	UBERON:0004804	68.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.10	gold quality
ventricular zone	UBERON:0003053	60.28	gold quality
left testis	UBERON:0004533	56.50	gold quality
right testis	UBERON:0004534	55.42	gold quality
testis	UBERON:0000473	55.39	gold quality
monocyte	CL:0000576	54.84	gold quality
cortical plate	UBERON:0005343	54.16	silver quality
calcaneal tendon	UBERON:0003701	54.13	gold quality
fallopian tube	UBERON:0003889	53.55	gold quality
deltoid	UBERON:0001476	51.39	gold quality
islet of Langerhans	UBERON:0000006	49.06	silver quality
lymph node	UBERON:0000029	49.02	gold quality
right lobe of thyroid gland	UBERON:0001119	48.46	silver quality
prefrontal cortex	UBERON:0000451	48.15	silver quality
muscle of leg	UBERON:0001383	48.05	silver quality
tendon	UBERON:0000043	47.30	silver quality
body of stomach	UBERON:0001161	46.66	gold quality
left ovary	UBERON:0002119	46.23	gold quality
cortex of kidney	UBERON:0001225	46.19	gold quality
tibial artery	UBERON:0007610	45.92	gold quality
superficial temporal artery	UBERON:0001614	45.78	gold quality
Brodmann (1909) area 9	UBERON:0013540	45.77	silver quality
tendon of biceps brachii	UBERON:0008188	45.48	gold quality
liver	UBERON:0002107	45.20	gold quality
hindlimb stylopod muscle	UBERON:0004252	45.13	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	44.99	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.88

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.