LINC02211

Summary

LINC02211 (long intergenic non-protein coding RNA 2211, HGNC:53078) is a long non-coding RNA gene on chromosome 5p14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53078
Approved symbol	LINC02211
Name	long intergenic non-protein coding RNA 2211
Location	5p14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000245662
Ensembl biotype	lncRNA
Entrez	105374693
RNAcentral	URS0000A774B2 — lncRNA, 327 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 23 — 23 lncRNA

ENST00000502100, ENST00000641091, ENST00000642022, ENST00000642024, ENST00000658074, ENST00000726851, ENST00000726852, ENST00000726853, ENST00000726854, ENST00000726855, ENST00000726856, ENST00000726857, ENST00000726858, ENST00000726859, ENST00000726860, ENST00000726861, ENST00000726862, ENST00000726863, ENST00000726864, ENST00000726865, ENST00000726866, ENST00000726867, ENST00000726868

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502100 — 5 exons

Exon	Start	End
ENSE00001960973	25190682	25191033
ENSE00002026807	25305899	25306172
ENSE00002031007	25297703	25297803
ENSE00002057414	25302218	25302345
ENSE00002061895	25298979	25299060

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 80.27.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.27	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.72	gold quality
placenta	UBERON:0001987	70.74	gold quality
testis	UBERON:0000473	61.36	gold quality
ventricular zone	UBERON:0003053	61.24	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.87	gold quality
muscle tissue	UBERON:0002385	60.77	gold quality
calcaneal tendon	UBERON:0003701	60.61	gold quality
right testis	UBERON:0004534	60.60	gold quality
left testis	UBERON:0004533	60.39	gold quality
ganglionic eminence	UBERON:0004023	60.05	gold quality
superior frontal gyrus	UBERON:0002661	59.15	gold quality
cortical plate	UBERON:0005343	59.00	gold quality
right coronary artery	UBERON:0001625	58.31	gold quality
stromal cell of endometrium	CL:0002255	56.89	gold quality
skeletal muscle tissue	UBERON:0001134	55.34	gold quality
monocyte	CL:0000576	54.10	gold quality
cortex of kidney	UBERON:0001225	52.90	gold quality
descending thoracic aorta	UBERON:0002345	52.86	gold quality
primary visual cortex	UBERON:0002436	52.84	gold quality
liver	UBERON:0002107	52.54	gold quality
bone marrow	UBERON:0002371	52.39	gold quality
gall bladder	UBERON:0002110	52.28	gold quality
corpus callosum	UBERON:0002336	52.08	gold quality
islet of Langerhans	UBERON:0000006	51.96	gold quality
blood	UBERON:0000178	51.08	gold quality
duodenum	UBERON:0002114	50.90	gold quality
pancreas	UBERON:0001264	50.86	gold quality
right lobe of liver	UBERON:0001114	50.28	gold quality
endometrium	UBERON:0001295	49.91	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.32

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.